Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbc1A0A0A6YWV4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbc1A0A0A6YWV4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbc1A0A0A6YWV4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm27742-201ENSMUST00000184667 60 ntBASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbc1A0A0A6YWV4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbc1A0A0A6YWV4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm10052-201ENSMUST00000168019 960 ntBASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm7729-201ENSMUST00000050143 801 ntBASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbc1A0A0A6YWV4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm15794-201ENSMUST00000120182 631 ntBASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms