Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6n-6A0A075B6B2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav6n-6A0A075B6B2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6n-6A0A075B6B2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6n-6A0A075B6B2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6n-6A0A075B6B2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6n-6A0A075B6B2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6n-6A0A075B6B2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6n-6A0A075B6B2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6n-6A0A075B6B2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6n-6A0A075B6B2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6n-6A0A075B6B2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Odf3b-204ENSMUST00000227834 930 ntBASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6n-6A0A075B6B2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6n-6A0A075B6B2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms