Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.85□□□□□ -0.35
Trav17A0A075B655 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Gm37856-201ENSMUST00000191634 999 ntBASIC12.85□□□□□ -0.35
Trav17A0A075B655 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav17A0A075B655 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.84□□□□□ -0.35
Trav17A0A075B655 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.84□□□□□ -0.35
Trav17A0A075B655 Gm7791-201ENSMUST00000219066 539 ntBASIC12.84□□□□□ -0.35
Trav17A0A075B655 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.84□□□□□ -0.35
Trav17A0A075B655 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.84□□□□□ -0.35
Trav17A0A075B655 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav17A0A075B655 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav17A0A075B655 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Trav17A0A075B655 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.83□□□□□ -0.35
Trav17A0A075B655 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav17A0A075B655 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Gm12441-201ENSMUST00000121806 588 ntBASIC12.83□□□□□ -0.36
Trav17A0A075B655 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.83□□□□□ -0.36
Trav17A0A075B655 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav17A0A075B655 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms