Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Gm17661-201ENSMUST00000170317 270 ntBASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Gm27000-201ENSMUST00000182943 842 ntBASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13-2A0A075B649 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Gm16011-201ENSMUST00000121567 2662 ntBASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13-2A0A075B649 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 AC115863.1-201ENSMUST00000214815 1813 ntBASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Gm43072-201ENSMUST00000200283 1671 ntBASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Nrn1-203ENSMUST00000223611 1443 ntBASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Gm12085-201ENSMUST00000119263 940 ntBASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 H2-K2-201ENSMUST00000174250 1049 ntBASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-2A0A075B649 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms