Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9n-4A0A075B631 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav9n-4A0A075B631 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9n-4A0A075B631 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9n-4A0A075B631 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9n-4A0A075B631 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9n-4A0A075B631 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9n-4A0A075B631 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9n-4A0A075B631 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9n-4A0A075B631 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Gm11539-201ENSMUST00000119837 557 ntBASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Gm30025-201ENSMUST00000218555 728 ntBASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-4A0A075B631 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Gm27011-201ENSMUST00000182352 972 ntBASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Gm2274-201ENSMUST00000184539 609 ntBASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Gm18115-201ENSMUST00000221209 621 ntBASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-4A0A075B631 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-4A0A075B631 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-4A0A075B631 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-4A0A075B631 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-4A0A075B631 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms