Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
Trav4n-4A0A075B615 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Gm42778-201ENSMUST00000199644 553 ntBASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4n-4A0A075B615 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4n-4A0A075B615 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav4n-4A0A075B615 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav4n-4A0A075B615 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav4n-4A0A075B615 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav4n-4A0A075B615 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav4n-4A0A075B615 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav4n-4A0A075B615 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav4n-4A0A075B615 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms