Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-6A0A075B603 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-6A0A075B603 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Gm20760-201ENSMUST00000179197 648 ntBASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-6A0A075B603 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms