Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav5-1A0A075B5Z7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-1A0A075B5Z7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Gm18195-201ENSMUST00000207604 706 ntBASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav5-1A0A075B5Z7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-1A0A075B5Z7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-1A0A075B5Z7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav5-1A0A075B5Z7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms