Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 AC013470.1-201ENST00000453438 462 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 RPS3P1-201ENST00000456781 192 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 AC008628.2-201ENST00000502605 298 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 SCARNA16.3-201ENST00000516595 184 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-965P-201ENST00000516721 96 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 MTND1P5-201ENST00000517906 940 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 AC109329.1-201ENST00000518744 317 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 AC107953.1-201ENST00000522216 297 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 AP005597.4-201ENST00000526762 229 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 IMMP1LP2-201ENST00000552954 492 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 AC007014.2-201ENST00000615581 479 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 AC100810.6-201ENST00000638068 285 ntBASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-1159P-201ENST00000362933 107 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 SNORD115-3-201ENST00000363100 82 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-944P-201ENST00000364023 107 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-743P-201ENST00000364151 106 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 MIR95-201ENST00000385072 81 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 MIR450B-201ENST00000401182 78 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 AL356432.1-201ENST00000405809 419 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 MIR1277-201ENST00000408536 78 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 RNU2-32P-201ENST00000411193 191 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 EDDM3CP-201ENST00000415977 425 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 SNRPEP10-201ENST00000420249 274 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 MTCYBP18-201ENST00000501056 747 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 RPL39P5-202ENST00000512505 151 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 SNORA48.11-201ENST00000517015 89 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-667P-201ENST00000517186 102 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 COPS8P3-201ENST00000526024 482 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 MIR3935-201ENST00000583472 104 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 BNIP3P16-201ENST00000589779 534 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 AC064836.2-201ENST00000609491 462 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 AC122108.2-201ENST00000611946 526 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 AP006437.1-201ENST00000641440 3685 ntBASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC71LQ8N9Z2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 ZNF702P-202ENST00000434269 1966 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-214P-201ENST00000384130 107 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-1222P-201ENST00000384615 107 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 RPS29P13-201ENST00000402041 169 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 RNA5SP338-201ENST00000410495 85 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-373P-201ENST00000411247 98 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 RPS15AP10-201ENST00000432472 382 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AC007547.1-201ENST00000462177 490 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 MTND4LP26-201ENST00000518144 282 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 ANP32BP3-201ENST00000559213 706 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AL031274.2-201ENST00000599419 203 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AC012493.3-201ENST00000604494 112 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AC104458.1-201ENST00000608243 463 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AC090617.10-201ENST00000624308 134 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AC121333.1-201ENST00000567488 2709 ntBASIC1.73□□□□□ -2.13
CCDC71LQ8N9Z2 AC002543.1-201ENST00000299783 1954 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-254P-201ENST00000363377 107 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-1329P-201ENST00000365664 107 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-43P-201ENST00000384302 107 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 CBX3P9-201ENST00000402326 552 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 NDUFA5P4-201ENST00000436704 385 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AL353689.1-201ENST00000438895 199 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AL359672.1-201ENST00000442302 409 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 MTCO2P3-201ENST00000442543 421 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 NFU1P2-201ENST00000448700 469 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AL109933.2-201ENST00000452651 260 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 RNU6-1037P-201ENST00000459571 107 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 UBE2DNL-203ENST00000474922 222 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 RPL30P1-201ENST00000488676 339 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AC092436.3-201ENST00000511788 257 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AC010486.1-201ENST00000511793 424 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 RNA5SP356-201ENST00000515972 94 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 RNA5SP281-201ENST00000516504 135 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AC034114.1-201ENST00000520293 285 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms