Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
LDB1Q86U70 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
LDB1Q86U70 AC007336.1-201ENST00000576365 3828 ntBASIC2.34□□□□□ -2.04
LDB1Q86U70 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
LDB1Q86U70 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LDB1Q86U70 RNA5SP289-201ENST00000362332 137 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 Y_RNA.504-201ENST00000384481 104 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 RNU6-1274P-201ENST00000384557 107 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 SNORA26.3-201ENST00000391119 136 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 FGF7P8-201ENST00000402994 292 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 HMGB3P2-201ENST00000411913 584 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.33□□□□□ -2.04
LDB1Q86U70 EIF1AXP1-201ENST00000419267 435 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 AL590632.1-201ENST00000424289 371 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 AL513328.1-201ENST00000446460 224 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LDB1Q86U70 RNU6-329P-201ENST00000459618 107 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 RN7SL636P-201ENST00000497504 294 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.33□□□□□ -2.04
LDB1Q86U70 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.33□□□□□ -2.04
LDB1Q86U70 SNORA31.16-201ENST00000516773 139 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 RNU6-1088P-201ENST00000516850 104 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 RNU6-273P-201ENST00000516937 96 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.33□□□□□ -2.04
LDB1Q86U70 AC021231.3-201ENST00000558497 370 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.33□□□□□ -2.04
LDB1Q86U70 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.33□□□□□ -2.04
LDB1Q86U70 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.33□□□□□ -2.04
LDB1Q86U70 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.33□□□□□ -2.04
LDB1Q86U70 AC103810.6-201ENST00000606708 136 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 MIR8076-201ENST00000611401 83 ntBASIC2.33□□□□□ -2.04
LDB1Q86U70 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
LDB1Q86U70 ZNF271P-202ENST00000465539 1970 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.32□□□□□ -2.04
LDB1Q86U70 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
LDB1Q86U70 MIR449A-201ENST00000362113 91 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 Y_RNA.151-201ENST00000363566 112 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 Y_RNA.301-201ENST00000364990 103 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 MIR521-1-201ENST00000384902 87 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.32□□□□□ -2.04
LDB1Q86U70 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 MTCO3P46-201ENST00000425787 232 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.32□□□□□ -2.04
LDB1Q86U70 CR769767.1-201ENST00000436337 346 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.32□□□□□ -2.04
LDB1Q86U70 RBMX2P4-201ENST00000441256 376 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 GPM6BP3-201ENST00000442797 145 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 PCMTD1P1-201ENST00000455560 355 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 MTCO2P30-201ENST00000503662 364 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 RNU6-566P-201ENST00000516790 107 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.32□□□□□ -2.04
LDB1Q86U70 AC078795.3-201ENST00000602913 472 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 AL022345.1-201ENST00000607292 135 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 SNORA43.4-201ENST00000629559 138 ntBASIC2.32□□□□□ -2.04
LDB1Q86U70 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LDB1Q86U70 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LDB1Q86U70 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
LDB1Q86U70 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
LDB1Q86U70 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.31□□□□□ -2.04
LDB1Q86U70 RNU4-15P-201ENST00000362613 141 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 Y_RNA.160-201ENST00000363677 92 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 SNORA67.1-201ENST00000364749 141 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 RNU6-790P-201ENST00000384479 105 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 MT-TL1-201ENST00000386347 75 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 RNU6-876P-201ENST00000391295 104 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 AL591034.2-201ENST00000402839 359 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 RN7SKP158-201ENST00000410453 326 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 MTND3P8-201ENST00000412909 339 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.31□□□□□ -2.04
LDB1Q86U70 AC009238.1-201ENST00000442165 424 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.31□□□□□ -2.04
LDB1Q86U70 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.31□□□□□ -2.04
LDB1Q86U70 AC009237.6-201ENST00000446969 424 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.31□□□□□ -2.04
LDB1Q86U70 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.31□□□□□ -2.04
LDB1Q86U70 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.31□□□□□ -2.04
LDB1Q86U70 RNU6-567P-201ENST00000516746 107 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 RNA5SP454-201ENST00000517231 127 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.31□□□□□ -2.04
LDB1Q86U70 AC016256.1-201ENST00000547971 354 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 AC026464.5-201ENST00000562497 722 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 MIR4742-201ENST00000581069 85 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 MIR4513-201ENST00000581077 86 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.31□□□□□ -2.04
LDB1Q86U70 IGHVIII-44-202ENST00000636235 289 ntBASIC2.31□□□□□ -2.04
LDB1Q86U70 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LDB1Q86U70 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
LDB1Q86U70 AC016717.2-201ENST00000609089 5141 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
LDB1Q86U70 CBX3P1-201ENST00000325243 554 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 RNU1-23P-201ENST00000363361 144 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 MIR144-201ENST00000384886 86 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 MTND1P23-201ENST00000416931 372 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 AL139396.1-201ENST00000421137 167 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 AC018634.1-201ENST00000437554 401 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.3□□□□□ -2.04
LDB1Q86U70 PPP1R2P5-201ENST00000457256 603 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 PRDX4P1-201ENST00000507189 574 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms