Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.29□□□□□ -2.36
ABCA4P78363 AL157398.1-201ENST00000452981 186 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.29□□□□□ -2.36
ABCA4P78363 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.29□□□□□ -2.36
ABCA4P78363 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.29□□□□□ -2.36
ABCA4P78363 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.29□□□□□ -2.36
ABCA4P78363 AL512347.1-201ENST00000566420 503 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 MIR1273C-201ENST00000578669 77 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 RSL24D1P11-201ENST00000591045 491 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 MTRNR2L2-201ENST00000604882 87 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.29□□□□□ -2.36
ABCA4P78363 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.29□□□□□ -2.36
ABCA4P78363 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
ABCA4P78363 RNU6-883P-201ENST00000384597 107 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 BX664727.1-201ENST00000416024 466 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.29□□□□□ -2.36
ABCA4P78363 snoU13.11-201ENST00000459219 104 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 AC104417.1-201ENST00000523974 751 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 RPL21P136-201ENST00000605378 396 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 AC100812.1-201ENST00000607622 580 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 MIR8084-201ENST00000614105 89 ntBASIC0.29□□□□□ -2.36
ABCA4P78363 MTND4P21-201ENST00000453886 1357 ntBASIC0.28□□□□□ -2.36
ABCA4P78363 Y_RNA.572-201ENST00000384757 98 ntBASIC0.28□□□□□ -2.36
ABCA4P78363 MIR1305-201ENST00000408300 86 ntBASIC0.28□□□□□ -2.36
ABCA4P78363 AL359704.1-201ENST00000411586 781 ntBASIC0.28□□□□□ -2.36
ABCA4P78363 TIMM9P2-201ENST00000419324 266 ntBASIC0.28□□□□□ -2.36
ABCA4P78363 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.28□□□□□ -2.36
ABCA4P78363 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.28□□□□□ -2.36
ABCA4P78363 Y_RNA.654-201ENST00000497848 106 ntBASIC0.28□□□□□ -2.36
ABCA4P78363 RNA5SP481-201ENST00000516814 122 ntBASIC0.28□□□□□ -2.36
ABCA4P78363 AP003327.1-201ENST00000529684 127 ntBASIC0.28□□□□□ -2.36
ABCA4P78363 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.28□□□□□ -2.36
ABCA4P78363 AL121579.1-201ENST00000555129 305 ntBASIC0.28□□□□□ -2.36
ABCA4P78363 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.28□□□□□ -2.36
ABCA4P78363 MIR3664-201ENST00000579074 99 ntBASIC0.28□□□□□ -2.36
ABCA4P78363 AC008088.1-201ENST00000580993 280 ntBASIC0.28□□□□□ -2.36
ABCA4P78363 PCMTD1P7-201ENST00000634506 357 ntBASIC0.28□□□□□ -2.36
ABCA4P78363 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
ABCA4P78363 RNU6-744P-201ENST00000365557 107 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 RNU6-1316P-201ENST00000384242 108 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 MIR605-201ENST00000385078 83 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.27□□□□□ -2.37
ABCA4P78363 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.27□□□□□ -2.37
ABCA4P78363 AC245047.7-201ENST00000440265 293 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.27□□□□□ -2.37
ABCA4P78363 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.27□□□□□ -2.37
ABCA4P78363 AC108729.2-201ENST00000476543 840 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 RAP1BP2-201ENST00000478270 544 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.27□□□□□ -2.37
ABCA4P78363 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.27□□□□□ -2.37
ABCA4P78363 RNU4-77P-201ENST00000516692 156 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 AC023538.1-201ENST00000534576 736 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.27□□□□□ -2.37
ABCA4P78363 MIR3912-201ENST00000577566 105 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 RNU6-87P-201ENST00000607561 108 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.27□□□□□ -2.37
ABCA4P78363 AC040896.1-201ENST00000613819 479 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.27□□□□□ -2.37
ABCA4P78363 SNORD114-24-201ENST00000365029 72 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 RNA5SP259-201ENST00000365541 109 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 SNORA50A-201ENST00000384225 134 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 Y_RNA.476-201ENST00000384347 108 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.27□□□□□ -2.37
ABCA4P78363 RPEP5-201ENST00000441137 268 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 AC130509.1-201ENST00000464158 433 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.27□□□□□ -2.37
ABCA4P78363 RNA5SP67-201ENST00000516422 131 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 RNU6-567P-201ENST00000516746 107 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 DEFB131D-201ENST00000526803 184 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 AL356057.1-201ENST00000533798 831 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 AL513534.2-201ENST00000603836 250 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 SNRPGP20-201ENST00000604477 205 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 AC092354.1-201ENST00000606057 376 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 AL357075.2-201ENST00000614906 189 ntBASIC0.27□□□□□ -2.37
ABCA4P78363 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
ABCA4P78363 AL159152.1-201ENST00000635019 2587 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.26□□□□□ -2.37
ABCA4P78363 AC006461.1-201ENST00000412637 326 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 MTCO1P21-201ENST00000416634 589 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 AC114482.1-201ENST00000418010 247 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 PAXBP1P1-201ENST00000449315 447 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 RPL18AP17-201ENST00000455326 198 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.26□□□□□ -2.37
ABCA4P78363 SNORA70.22-201ENST00000517160 124 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 AL136363.2-201ENST00000604173 851 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 AL022154.1-201ENST00000604698 785 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 AC106858.1-201ENST00000637497 429 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
ABCA4P78363 RNA5SP361-201ENST00000362686 118 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 U3.8-201ENST00000363675 217 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 U6.112-201ENST00000384129 70 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 Y_RNA.552-201ENST00000384665 112 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 AL158050.1-201ENST00000416077 457 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 PDCL2P1-201ENST00000419302 352 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.26□□□□□ -2.37
ABCA4P78363 LARP1BP3-201ENST00000437229 869 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
ABCA4P78363 AC104692.1-201ENST00000472406 90 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms