Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC092989.1-201ENST00000481235 277 ntBASIC2.92□□□□□ -1.94
RHBDL3P58872 AC145146.1-201ENST00000496370 254 ntBASIC2.92□□□□□ -1.94
RHBDL3P58872 RNU6-718P-201ENST00000516166 105 ntBASIC2.92□□□□□ -1.94
RHBDL3P58872 RNU6-256P-201ENST00000516747 97 ntBASIC2.92□□□□□ -1.94
RHBDL3P58872 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.92□□□□□ -1.94
RHBDL3P58872 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.92□□□□□ -1.94
RHBDL3P58872 AC046143.2-201ENST00000609789 160 ntBASIC2.92□□□□□ -1.94
RHBDL3P58872 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
RHBDL3P58872 RNU4-15P-201ENST00000362613 141 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 RNU6-944P-201ENST00000364023 107 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 SNORA3A-201ENST00000364113 130 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 SNORD114-30-201ENST00000364448 72 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 RNU6-1317P-201ENST00000364582 104 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 SNORA6-201ENST00000384033 151 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RHBDL3P58872 MTCYBP2-201ENST00000407745 171 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 RNU6-325P-201ENST00000411132 105 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.91□□□□□ -1.94
RHBDL3P58872 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.91□□□□□ -1.94
RHBDL3P58872 IPO7P1-201ENST00000442031 636 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 AMD1P1-201ENST00000457220 922 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 MTCYBP18-201ENST00000501056 747 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.91□□□□□ -1.94
RHBDL3P58872 ANXA2P1-201ENST00000505539 926 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 AC121758.2-201ENST00000553271 193 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.91□□□□□ -1.94
RHBDL3P58872 CYP4A27P-201ENST00000567218 190 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.91□□□□□ -1.94
RHBDL3P58872 AP003465.2-201ENST00000602571 373 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 AP000654.2-201ENST00000605633 586 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RHBDL3P58872 MIR8076-201ENST00000611401 83 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 AC093913.1-201ENST00000614178 329 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 AC063943.3-201ENST00000615562 356 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 MIR6715A-201ENST00000615929 79 ntBASIC2.91□□□□□ -1.94
RHBDL3P58872 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RHBDL3P58872 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.9□□□□□ -1.95
RHBDL3P58872 MTND3P9-201ENST00000429526 346 ntBASIC2.9□□□□□ -1.95
RHBDL3P58872 AL137159.1-201ENST00000452808 512 ntBASIC2.9□□□□□ -1.95
RHBDL3P58872 AC008571.1-201ENST00000467232 300 ntBASIC2.9□□□□□ -1.95
RHBDL3P58872 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.9□□□□□ -1.95
RHBDL3P58872 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.9□□□□□ -1.95
RHBDL3P58872 YWHAEP4-201ENST00000505390 198 ntBASIC2.9□□□□□ -1.95
RHBDL3P58872 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.9□□□□□ -1.95
RHBDL3P58872 SNORA31.16-201ENST00000516773 139 ntBASIC2.9□□□□□ -1.95
RHBDL3P58872 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.9□□□□□ -1.95
RHBDL3P58872 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.9□□□□□ -1.95
RHBDL3P58872 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.9□□□□□ -1.95
RHBDL3P58872 SNORA59B-202ENST00000578183 701 ntBASIC2.9□□□□□ -1.95
RHBDL3P58872 MIR5092-201ENST00000583139 88 ntBASIC2.9□□□□□ -1.95
RHBDL3P58872 AC068944.2-201ENST00000610373 403 ntBASIC2.9□□□□□ -1.95
RHBDL3P58872 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.9□□□□□ -1.95
RHBDL3P58872 AC002553.4-201ENST00000616896 331 ntBASIC2.9□□□□□ -1.95
RHBDL3P58872 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.9□□□□□ -1.95
RHBDL3P58872 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
RHBDL3P58872 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RHBDL3P58872 RNU6-562P-201ENST00000362731 107 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 MIR592-201ENST00000384959 97 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 SNORA46.1-201ENST00000391069 153 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RHBDL3P58872 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.89□□□□□ -1.95
RHBDL3P58872 IFNA20P-201ENST00000436840 528 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 MTCO3P18-201ENST00000440206 761 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 MTND4LP16-201ENST00000440828 295 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 IFNA11P-201ENST00000446352 526 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 AL513124.1-201ENST00000450410 614 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 GSTA11P-201ENST00000452866 669 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 RNU7-66P-201ENST00000459469 62 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 RPS29P25-201ENST00000481709 171 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.89□□□□□ -1.95
RHBDL3P58872 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.89□□□□□ -1.95
RHBDL3P58872 RNU6-1314P-201ENST00000517139 104 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.89□□□□□ -1.95
RHBDL3P58872 Z98751.3-201ENST00000604447 521 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 RPL17P51-201ENST00000605218 238 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 AL138726.1-201ENST00000614873 333 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 MIR1291-201ENST00000627649 87 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 AC100810.6-201ENST00000638068 285 ntBASIC2.89□□□□□ -1.95
RHBDL3P58872 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.89□□□□□ -1.95
RHBDL3P58872 U3.9-201ENST00000363823 204 ntBASIC2.88□□□□□ -1.95
RHBDL3P58872 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RHBDL3P58872 SRIP3-201ENST00000413200 219 ntBASIC2.88□□□□□ -1.95
RHBDL3P58872 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.88□□□□□ -1.95
RHBDL3P58872 AP000705.1-201ENST00000454567 350 ntBASIC2.88□□□□□ -1.95
RHBDL3P58872 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.88□□□□□ -1.95
RHBDL3P58872 HMGB3P3-201ENST00000510526 400 ntBASIC2.88□□□□□ -1.95
RHBDL3P58872 AC026436.1-201ENST00000510537 270 ntBASIC2.88□□□□□ -1.95
RHBDL3P58872 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.88□□□□□ -1.95
RHBDL3P58872 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.88□□□□□ -1.95
RHBDL3P58872 MYL12BP1-201ENST00000569826 507 ntBASIC2.88□□□□□ -1.95
RHBDL3P58872 CPDP1-201ENST00000579660 283 ntBASIC2.88□□□□□ -1.95
RHBDL3P58872 AL031274.2-201ENST00000599419 203 ntBASIC2.88□□□□□ -1.95
RHBDL3P58872 AC078795.3-201ENST00000602913 472 ntBASIC2.88□□□□□ -1.95
RHBDL3P58872 AC092794.1-201ENST00000612734 582 ntBASIC2.88□□□□□ -1.95
RHBDL3P58872 AC090617.10-201ENST00000624308 134 ntBASIC2.88□□□□□ -1.95
RHBDL3P58872 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
RHBDL3P58872 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RHBDL3P58872 RNU6-1252P-201ENST00000363054 104 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 Y_RNA.212-201ENST00000364177 102 ntBASIC2.87□□□□□ -1.95
RHBDL3P58872 SNORD32B-201ENST00000364460 84 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms