Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SNORD18A-201ENST00000363753 72 ntBASIC0.33□□□□□ -2.36
SRP9P49458 RNU5A-8P-201ENST00000364102 114 ntBASIC0.33□□□□□ -2.36
SRP9P49458 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
SRP9P49458 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
SRP9P49458 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.33□□□□□ -2.36
SRP9P49458 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SRP9P49458 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
SRP9P49458 SNORD79.1-201ENST00000516069 84 ntBASIC0.33□□□□□ -2.36
SRP9P49458 MIR4711-201ENST00000578274 70 ntBASIC0.33□□□□□ -2.36
SRP9P49458 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.33□□□□□ -2.36
SRP9P49458 AL158163.2-201ENST00000619110 700 ntBASIC0.33□□□□□ -2.36
SRP9P49458 MIR412-201ENST00000362142 91 ntBASIC0.32□□□□□ -2.36
SRP9P49458 snoZ40.1-201ENST00000364540 72 ntBASIC0.32□□□□□ -2.36
SRP9P49458 Y_RNA.363-201ENST00000365529 113 ntBASIC0.32□□□□□ -2.36
SRP9P49458 MIR598-201ENST00000384868 97 ntBASIC0.32□□□□□ -2.36
SRP9P49458 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.32□□□□□ -2.36
SRP9P49458 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.32□□□□□ -2.36
SRP9P49458 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.32□□□□□ -2.36
SRP9P49458 RNA5SP255-201ENST00000516370 107 ntBASIC0.32□□□□□ -2.36
SRP9P49458 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.32□□□□□ -2.36
SRP9P49458 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.32□□□□□ -2.36
SRP9P49458 AC018659.1-201ENST00000551083 169 ntBASIC0.32□□□□□ -2.36
SRP9P49458 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.32□□□□□ -2.36
SRP9P49458 AL353765.1-201ENST00000605514 183 ntBASIC0.32□□□□□ -2.36
SRP9P49458 AC104073.3-201ENST00000610942 955 ntBASIC0.32□□□□□ -2.36
SRP9P49458 AL138955.1-201ENST00000622881 1040 ntBASIC0.32□□□□□ -2.36
SRP9P49458 SCARNA4-202ENST00000625402 129 ntBASIC0.32□□□□□ -2.36
SRP9P49458 AC092104.1-201ENST00000497346 1441 ntBASIC0.31□□□□□ -2.36
SRP9P49458 RNY1-201ENST00000364228 113 ntBASIC0.31□□□□□ -2.36
SRP9P49458 RNU6-969P-201ENST00000383900 105 ntBASIC0.31□□□□□ -2.36
SRP9P49458 RNU6-945P-201ENST00000383947 107 ntBASIC0.31□□□□□ -2.36
SRP9P49458 SNORA32.2-201ENST00000384049 122 ntBASIC0.31□□□□□ -2.36
SRP9P49458 SNORD12-201ENST00000391002 90 ntBASIC0.31□□□□□ -2.36
SRP9P49458 MIR320C1-201ENST00000408566 88 ntBASIC0.31□□□□□ -2.36
SRP9P49458 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.31□□□□□ -2.36
SRP9P49458 MTCO2P1-201ENST00000424648 477 ntBASIC0.31□□□□□ -2.36
SRP9P49458 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.31□□□□□ -2.36
SRP9P49458 RPL39P38-201ENST00000467018 153 ntBASIC0.31□□□□□ -2.36
SRP9P49458 AC104806.1-201ENST00000508720 308 ntBASIC0.31□□□□□ -2.36
SRP9P49458 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.31□□□□□ -2.36
SRP9P49458 AC112206.3-201ENST00000514578 389 ntBASIC0.31□□□□□ -2.36
SRP9P49458 Y_RNA.673-201ENST00000516306 88 ntBASIC0.31□□□□□ -2.36
SRP9P49458 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.31□□□□□ -2.36
SRP9P49458 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.31□□□□□ -2.36
SRP9P49458 MIR3136-201ENST00000583498 78 ntBASIC0.31□□□□□ -2.36
SRP9P49458 AL354696.1-201ENST00000614652 497 ntBASIC0.31□□□□□ -2.36
SRP9P49458 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.31□□□□□ -2.36
SRP9P49458 AL589743.1-201ENST00000551932 2712 ntBASIC0.31□□□□□ -2.36
SRP9P49458 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
SRP9P49458 RNU6-190P-201ENST00000384154 102 ntBASIC0.3□□□□□ -2.36
SRP9P49458 MIR544A-201ENST00000384855 91 ntBASIC0.3□□□□□ -2.36
SRP9P49458 AF228730.1-201ENST00000397972 663 ntBASIC0.3□□□□□ -2.36
SRP9P49458 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.3□□□□□ -2.36
SRP9P49458 AC069257.2-201ENST00000441819 155 ntBASIC0.3□□□□□ -2.36
SRP9P49458 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.3□□□□□ -2.36
SRP9P49458 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.3□□□□□ -2.36
SRP9P49458 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.3□□□□□ -2.36
SRP9P49458 AC021231.3-201ENST00000558497 370 ntBASIC0.3□□□□□ -2.36
SRP9P49458 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.3□□□□□ -2.36
SRP9P49458 AC110760.3-201ENST00000598794 467 ntBASIC0.3□□□□□ -2.36
SRP9P49458 AL034555.1-201ENST00000604816 211 ntBASIC0.3□□□□□ -2.36
SRP9P49458 AC018889.1-201ENST00000605372 397 ntBASIC0.3□□□□□ -2.36
SRP9P49458 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
SRP9P49458 MIR6516-201ENST00000630554 81 ntBASIC0.3□□□□□ -2.36
SRP9P49458 RNU6-1123P-201ENST00000362347 106 ntBASIC0.29□□□□□ -2.36
SRP9P49458 U3.8-201ENST00000363675 217 ntBASIC0.29□□□□□ -2.36
SRP9P49458 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.29□□□□□ -2.36
SRP9P49458 VPS26BP1-201ENST00000417155 755 ntBASIC0.29□□□□□ -2.36
SRP9P49458 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.29□□□□□ -2.36
SRP9P49458 AL035398.1-201ENST00000430869 322 ntBASIC0.29□□□□□ -2.36
SRP9P49458 AL596276.1-201ENST00000434465 418 ntBASIC0.29□□□□□ -2.36
SRP9P49458 AC245047.7-201ENST00000440265 293 ntBASIC0.29□□□□□ -2.36
SRP9P49458 AC007969.2-201ENST00000441891 191 ntBASIC0.29□□□□□ -2.36
SRP9P49458 AL358794.1-201ENST00000445689 381 ntBASIC0.29□□□□□ -2.36
SRP9P49458 MTCO1P27-201ENST00000448269 226 ntBASIC0.29□□□□□ -2.36
SRP9P49458 MTND2P3-201ENST00000452458 470 ntBASIC0.29□□□□□ -2.36
SRP9P49458 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.29□□□□□ -2.36
SRP9P49458 RNA5SP436-201ENST00000516020 115 ntBASIC0.29□□□□□ -2.36
SRP9P49458 RNU6-751P-201ENST00000516382 101 ntBASIC0.29□□□□□ -2.36
SRP9P49458 Y_RNA.689-201ENST00000516589 107 ntBASIC0.29□□□□□ -2.36
SRP9P49458 DEFB130C-202ENST00000530001 230 ntBASIC0.29□□□□□ -2.36
SRP9P49458 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.29□□□□□ -2.36
SRP9P49458 AC109446.1-201ENST00000566172 220 ntBASIC0.29□□□□□ -2.36
SRP9P49458 AL138889.2-201ENST00000603883 242 ntBASIC0.29□□□□□ -2.36
SRP9P49458 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
SRP9P49458 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
SRP9P49458 MIR1284-201ENST00000408337 120 ntBASIC0.28□□□□□ -2.36
SRP9P49458 RNA5SP193-201ENST00000410353 107 ntBASIC0.28□□□□□ -2.36
SRP9P49458 RNU6-1054P-201ENST00000411293 104 ntBASIC0.28□□□□□ -2.36
SRP9P49458 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.28□□□□□ -2.36
SRP9P49458 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.28□□□□□ -2.36
SRP9P49458 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.28□□□□□ -2.36
SRP9P49458 MTCO3P18-201ENST00000440206 761 ntBASIC0.28□□□□□ -2.36
SRP9P49458 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.28□□□□□ -2.36
SRP9P49458 AL353718.1-201ENST00000451028 517 ntBASIC0.28□□□□□ -2.36
SRP9P49458 AC006026.2-201ENST00000457376 180 ntBASIC0.28□□□□□ -2.36
SRP9P49458 AC010531.2-201ENST00000465012 153 ntBASIC0.28□□□□□ -2.36
SRP9P49458 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
SRP9P49458 MTCO3P9-201ENST00000506989 781 ntBASIC0.28□□□□□ -2.36
SRP9P49458 MTCO3P7-201ENST00000510008 774 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms