Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
CD40LGP29965 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
CD40LGP29965 U4.7-201ENST00000638126 106 ntBASIC0.82□□□□□ -2.28
CD40LGP29965 Y_RNA.97-201ENST00000363094 102 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 RNU6-39P-201ENST00000384344 107 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 SNORA24.1-201ENST00000384401 135 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 MIR19B1-201ENST00000384829 87 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 RNU6-321P-201ENST00000410912 106 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 RNU6-1245P-201ENST00000411130 106 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.81□□□□□ -2.28
CD40LGP29965 AP000275.1-201ENST00000411943 390 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.81□□□□□ -2.28
CD40LGP29965 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.81□□□□□ -2.28
CD40LGP29965 MTND1P20-201ENST00000430341 950 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 AL603825.1-201ENST00000438481 80 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 HSPE1P13-201ENST00000451143 297 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.81□□□□□ -2.28
CD40LGP29965 AC016925.1-201ENST00000458303 298 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 COX6CP14-201ENST00000469580 174 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 HMGN1P7-201ENST00000491722 313 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 HSPE1P23-201ENST00000509838 286 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.81□□□□□ -2.28
CD40LGP29965 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.81□□□□□ -2.28
CD40LGP29965 AC087883.1-201ENST00000551882 391 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 AC109446.1-201ENST00000566172 220 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.81□□□□□ -2.28
CD40LGP29965 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.81□□□□□ -2.28
CD40LGP29965 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 AC004808.1-201ENST00000627671 721 ntBASIC0.81□□□□□ -2.28
CD40LGP29965 RNU6-809P-201ENST00000384461 107 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 SNORA40.4-201ENST00000390971 128 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 RNA5SP111-201ENST00000411386 101 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 COX6CP10-201ENST00000416832 224 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 C1DP2-201ENST00000418167 426 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 RPS4XP11-201ENST00000446897 772 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 AC007395.1-201ENST00000451333 677 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.8□□□□□ -2.28
CD40LGP29965 RPS26P45-201ENST00000471748 340 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.8□□□□□ -2.28
CD40LGP29965 MTND3P25-201ENST00000509243 135 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 AC105185.1-201ENST00000518705 535 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.8□□□□□ -2.28
CD40LGP29965 ZNF519P3-201ENST00000557158 1032 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.8□□□□□ -2.28
CD40LGP29965 MIR5692A1-201ENST00000580523 69 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 AC008521.1-201ENST00000587471 187 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 AL139418.1-201ENST00000613613 177 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 AL157786.1-207ENST00000627771 695 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 AC068647.2-201ENST00000637380 353 ntBASIC0.8□□□□□ -2.28
CD40LGP29965 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
CD40LGP29965 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 Y_RNA.302-201ENST00000364997 102 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 AL117342.1-201ENST00000404861 406 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 RN7SKP61-201ENST00000410642 295 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 AC000111.3-201ENST00000433478 193 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 AC243964.1-201ENST00000441814 261 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 Y_RNA.638-201ENST00000459374 113 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 SNRPGP7-201ENST00000469016 106 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 AC103851.1-201ENST00000506833 274 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 AL442163.3-201ENST00000554110 156 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.79□□□□□ -2.28
CD40LGP29965 SNORA59B-202ENST00000578183 701 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 AP005136.1-201ENST00000579765 429 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 HMGN1P30-201ENST00000589286 268 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 AC073539.2-201ENST00000597113 165 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 AC012507.3-201ENST00000603556 477 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.79□□□□□ -2.28
CD40LGP29965 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.79□□□□□ -2.28
CD40LGP29965 RNU6-931P-201ENST00000363850 107 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 RNU6-105P-201ENST00000363909 104 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 RNU6-1141P-201ENST00000364520 107 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 MIR222-201ENST00000384992 110 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 AL356776.1-201ENST00000406574 447 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 RNU2-3P-201ENST00000410144 191 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 RNA5SP201-201ENST00000410316 124 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 RNU2-64P-201ENST00000411315 191 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 MTCO2P21-201ENST00000419780 677 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.78□□□□□ -2.28
CD40LGP29965 PIGFP2-201ENST00000421400 651 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CD40LGP29965 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.78□□□□□ -2.28
CD40LGP29965 AC007283.2-201ENST00000424739 197 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.78□□□□□ -2.28
CD40LGP29965 RPL37P21-201ENST00000435890 276 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 AC073910.1-201ENST00000445047 438 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 AC010531.2-201ENST00000465012 153 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.78□□□□□ -2.28
CD40LGP29965 AF131216.2-201ENST00000512316 564 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 SNORA70.22-201ENST00000517160 124 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.78□□□□□ -2.28
CD40LGP29965 MIR4709-201ENST00000577272 72 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 AC008088.1-201ENST00000580993 280 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
CD40LGP29965 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.78□□□□□ -2.28
CD40LGP29965 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.78□□□□□ -2.28
CD40LGP29965 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms