Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC007064.1-201ENST00000412238 351 ntBASIC2.33□□□□□ -2.04
SSX4O60224 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.33□□□□□ -2.04
SSX4O60224 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.33□□□□□ -2.04
SSX4O60224 AL590135.1-201ENST00000422215 156 ntBASIC2.33□□□□□ -2.04
SSX4O60224 AC019205.3-201ENST00000424573 156 ntBASIC2.33□□□□□ -2.04
SSX4O60224 AC078809.1-201ENST00000427601 140 ntBASIC2.33□□□□□ -2.04
SSX4O60224 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.33□□□□□ -2.04
SSX4O60224 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.33□□□□□ -2.04
SSX4O60224 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.33□□□□□ -2.04
SSX4O60224 AL161788.1-201ENST00000441805 169 ntBASIC2.33□□□□□ -2.04
SSX4O60224 AC016700.2-201ENST00000446011 156 ntBASIC2.33□□□□□ -2.04
SSX4O60224 FTH1P25-201ENST00000447665 469 ntBASIC2.33□□□□□ -2.04
SSX4O60224 MTND1P17-201ENST00000448961 204 ntBASIC2.33□□□□□ -2.04
SSX4O60224 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.33□□□□□ -2.04
SSX4O60224 TRBV12-1-201ENST00000479785 344 ntBASIC2.33□□□□□ -2.04
SSX4O60224 AC015911.1-201ENST00000495111 156 ntBASIC2.33□□□□□ -2.04
SSX4O60224 HMGB1P35-201ENST00000503360 598 ntBASIC2.33□□□□□ -2.04
SSX4O60224 HMGB3P3-201ENST00000510526 400 ntBASIC2.33□□□□□ -2.04
SSX4O60224 SNORA31.16-201ENST00000516773 139 ntBASIC2.33□□□□□ -2.04
SSX4O60224 RNU7-30P-201ENST00000516835 62 ntBASIC2.33□□□□□ -2.04
SSX4O60224 SNORA20.3-201ENST00000516880 132 ntBASIC2.33□□□□□ -2.04
SSX4O60224 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.33□□□□□ -2.04
SSX4O60224 IMMP1LP2-201ENST00000552954 492 ntBASIC2.33□□□□□ -2.04
SSX4O60224 AC007375.1-201ENST00000554513 578 ntBASIC2.33□□□□□ -2.04
SSX4O60224 MIR4790-201ENST00000577799 79 ntBASIC2.33□□□□□ -2.04
SSX4O60224 AP001094.1-201ENST00000579805 193 ntBASIC2.33□□□□□ -2.04
SSX4O60224 MIR4658-201ENST00000584344 65 ntBASIC2.33□□□□□ -2.04
SSX4O60224 AL022345.1-201ENST00000607292 135 ntBASIC2.33□□□□□ -2.04
SSX4O60224 MIR8076-201ENST00000611401 83 ntBASIC2.33□□□□□ -2.04
SSX4O60224 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.33□□□□□ -2.04
SSX4O60224 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SSX4O60224 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SSX4O60224 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.33□□□□□ -2.04
SSX4O60224 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.33□□□□□ -2.04
SSX4O60224 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.32□□□□□ -2.04
SSX4O60224 SNORD62.1-201ENST00000362541 86 ntBASIC2.32□□□□□ -2.04
SSX4O60224 RNA5SP240-201ENST00000365355 128 ntBASIC2.32□□□□□ -2.04
SSX4O60224 U8.8-201ENST00000365399 135 ntBASIC2.32□□□□□ -2.04
SSX4O60224 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
SSX4O60224 MIR517A-201ENST00000385001 87 ntBASIC2.32□□□□□ -2.04
SSX4O60224 MIR95-201ENST00000385072 81 ntBASIC2.32□□□□□ -2.04
SSX4O60224 MIR9-1-201ENST00000385198 89 ntBASIC2.32□□□□□ -2.04
SSX4O60224 RN7SKP32-201ENST00000410167 303 ntBASIC2.32□□□□□ -2.04
SSX4O60224 RNA5SP21-201ENST00000410917 96 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.32□□□□□ -2.04
SSX4O60224 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.32□□□□□ -2.04
SSX4O60224 CYP2C59P-201ENST00000457790 269 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.32□□□□□ -2.04
SSX4O60224 SRIP1-201ENST00000489235 288 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AC016632.1-201ENST00000503994 196 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AC022447.4-201ENST00000504053 364 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.32□□□□□ -2.04
SSX4O60224 AC096725.1-201ENST00000514266 313 ntBASIC2.32□□□□□ -2.04
SSX4O60224 RNU6-586P-201ENST00000517265 104 ntBASIC2.32□□□□□ -2.04
SSX4O60224 PRELID2P1-201ENST00000552837 301 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.32□□□□□ -2.04
SSX4O60224 MIR3945-201ENST00000581853 98 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AL355297.2-201ENST00000604792 129 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AL034555.1-201ENST00000604816 211 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AL161423.1-201ENST00000613700 262 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AC022306.2-201ENST00000617563 647 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AC008121.3-201ENST00000618726 433 ntBASIC2.32□□□□□ -2.04
SSX4O60224 SNORA43.4-201ENST00000629559 138 ntBASIC2.32□□□□□ -2.04
SSX4O60224 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AL450472.1-202ENST00000637286 180 ntBASIC2.32□□□□□ -2.04
SSX4O60224 AC080100.1-201ENST00000624239 5356 ntBASIC2.32□□□□□ -2.04
SSX4O60224 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
SSX4O60224 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SSX4O60224 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SSX4O60224 AC092268.1-201ENST00000342691 405 ntBASIC2.31□□□□□ -2.04
SSX4O60224 Y_RNA.123-201ENST00000363338 102 ntBASIC2.31□□□□□ -2.04
SSX4O60224 RNU6-1274P-201ENST00000384557 107 ntBASIC2.31□□□□□ -2.04
SSX4O60224 AL139396.1-201ENST00000421137 167 ntBASIC2.31□□□□□ -2.04
SSX4O60224 Z82205.1-201ENST00000428456 297 ntBASIC2.31□□□□□ -2.04
SSX4O60224 GPM6BP3-201ENST00000442797 145 ntBASIC2.31□□□□□ -2.04
SSX4O60224 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.31□□□□□ -2.04
SSX4O60224 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.31□□□□□ -2.04
SSX4O60224 RPS3P1-201ENST00000456781 192 ntBASIC2.31□□□□□ -2.04
SSX4O60224 AC104564.1-201ENST00000493028 407 ntBASIC2.31□□□□□ -2.04
SSX4O60224 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.31□□□□□ -2.04
SSX4O60224 HMGN1P12-201ENST00000499125 195 ntBASIC2.31□□□□□ -2.04
SSX4O60224 AC107222.1-201ENST00000510899 637 ntBASIC2.31□□□□□ -2.04
SSX4O60224 AC008413.1-201ENST00000511864 177 ntBASIC2.31□□□□□ -2.04
SSX4O60224 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.31□□□□□ -2.04
SSX4O60224 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.31□□□□□ -2.04
SSX4O60224 AC118273.2-201ENST00000532092 465 ntBASIC2.31□□□□□ -2.04
SSX4O60224 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.31□□□□□ -2.04
SSX4O60224 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.31□□□□□ -2.04
SSX4O60224 MIR3136-201ENST00000583498 78 ntBASIC2.31□□□□□ -2.04
SSX4O60224 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.31□□□□□ -2.04
SSX4O60224 AC078795.3-201ENST00000602913 472 ntBASIC2.31□□□□□ -2.04
SSX4O60224 AC018889.1-201ENST00000605372 397 ntBASIC2.31□□□□□ -2.04
SSX4O60224 AC019193.3-201ENST00000609144 554 ntBASIC2.31□□□□□ -2.04
SSX4O60224 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SSX4O60224 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.3□□□□□ -2.04
SSX4O60224 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SSX4O60224 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SSX4O60224 RNA5SP68-201ENST00000363885 119 ntBASIC2.3□□□□□ -2.04
SSX4O60224 Y_RNA.303-201ENST00000364998 94 ntBASIC2.3□□□□□ -2.04
SSX4O60224 RNU6-142P-201ENST00000384019 107 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms