Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC091812.1-201ENST00000432235 1948 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 SNORD115-8-201ENST00000363856 82 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 SNORD115-38-201ENST00000365037 82 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 CD24P4-201ENST00000382840 243 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 U8.10-201ENST00000384260 133 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 MIR196B-201ENST00000384852 84 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 MIR153-2-201ENST00000385225 87 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 MIR764-201ENST00000390811 85 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 RNU6-823P-201ENST00000391042 103 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 AL133475.1-201ENST00000404414 305 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 MIR548F4-201ENST00000408515 105 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 BMS1P22-201ENST00000414726 313 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 AIG1P1-201ENST00000503376 148 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 UBL5P2-201ENST00000583788 219 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 AL078605.1-201ENST00000603529 500 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 Z98751.3-201ENST00000604447 521 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 AC005520.5-201ENST00000613926 164 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 AC064859.1-201ENST00000624741 174 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 AL359854.1-201ENST00000614203 1594 ntBASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 RNU6-529P-201ENST00000363383 104 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 Y_RNA.526-201ENST00000384572 110 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 Y_RNA.605-201ENST00000410577 105 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 AC017079.2-201ENST00000416102 485 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 AL358176.2-201ENST00000425769 204 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 RPS29P31-201ENST00000446147 164 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 OR2AQ1P-201ENST00000451972 200 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 RN7SL585P-201ENST00000470538 280 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 HMGB1P35-201ENST00000503360 598 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 RNA5SP445-201ENST00000515889 115 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 RNA5SP24-201ENST00000516478 95 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 AC091144.1-201ENST00000519573 138 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 AC006600.1-201ENST00000572529 153 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 MIR4644-201ENST00000579929 84 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 AC113195.1-201ENST00000579952 141 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 UCA1.1-201ENST00000620952 75 ntBASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CCDC85CA6NKD9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AL356274.2-201ENST00000624379 3752 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 Y_RNA.380-201ENST00000365663 111 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 SNORA36A-201ENST00000384221 132 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 Y_RNA.485-201ENST00000384395 102 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 RNU1-57P-201ENST00000384491 166 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 Y_RNA.527-201ENST00000384573 102 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 RNU1-139P-201ENST00000391307 165 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 EI24P2-201ENST00000397776 1076 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 MTCO3P19-201ENST00000415864 321 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AC138623.1-201ENST00000418060 216 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AL590135.1-201ENST00000422215 156 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AC012306.1-201ENST00000423267 114 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AC019205.3-201ENST00000424573 156 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AC063976.3-201ENST00000426849 329 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AL139132.1-201ENST00000431587 344 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AC016700.2-201ENST00000446011 156 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 SNRPGP7-201ENST00000469016 106 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AC021146.2-201ENST00000504736 556 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 RNU5F-2P-201ENST00000516066 82 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AL117187.1-201ENST00000555482 181 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 CYP4A43P-201ENST00000568156 121 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AC090617.3-201ENST00000573670 475 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AC073410.2-201ENST00000603240 332 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AC107294.3-201ENST00000609211 526 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 SNORD98-201ENST00000636377 67 ntBASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC85CA6NKD9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 Y_RNA.133-201ENST00000363428 110 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 RNY3P11-201ENST00000364153 102 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 MIR186-201ENST00000384988 86 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms