Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 AC091564.4-201ENST00000533934 2194 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 BX322639.1-202ENST00000423987 2213 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 AC007496.3-201ENST00000624987 3443 ntBASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-1210P-201ENST00000363775 107 ntBASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-1145P-201ENST00000384246 107 ntBASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 RNU1-57P-201ENST00000384491 166 ntBASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 MIR487A-201ENST00000385009 80 ntBASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 MIR329-1-201ENST00000385028 80 ntBASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 SNORD12B-201ENST00000410433 91 ntBASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 AC112220.1-201ENST00000434628 355 ntBASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 AC006539.3-201ENST00000454258 129 ntBASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-1132P-201ENST00000459214 107 ntBASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 AC026333.2-201ENST00000542164 106 ntBASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 MIR376A1-201ENST00000616574 68 ntBASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHA9Q9Y5H5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 AC010615.1-201ENST00000594254 1764 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-655P-201ENST00000362858 107 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 Y_RNA.143-201ENST00000363520 106 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 RNA5SP139-201ENST00000364340 117 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 Y_RNA.307-201ENST00000365022 117 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-245P-201ENST00000384020 107 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 Y_RNA.483-201ENST00000384380 101 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 Y_RNA.489-201ENST00000384410 101 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-1093P-201ENST00000391194 107 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 CBX3P9-201ENST00000402326 552 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-847P-201ENST00000411115 108 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 AC096920.1-201ENST00000423991 241 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 AC009414.1-201ENST00000427200 443 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 RPS4XP2-201ENST00000458402 793 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 AC112771.1-201ENST00000463581 102 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 TRBVB-201ENST00000477100 408 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 AC021205.2-201ENST00000480069 347 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 AC093663.1-201ENST00000497190 394 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 CYCSP23-201ENST00000519781 313 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 AC106785.1-201ENST00000565935 262 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 AC136932.1-201ENST00000574771 208 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 MIR4300-201ENST00000581016 96 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 AC110079.1-202ENST00000635213 138 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 AL359854.1-201ENST00000614203 1594 ntBASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHA9Q9Y5H5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHA9Q9Y5H5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHA9Q9Y5H5 RNA5SP361-201ENST00000362686 118 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 RNA5SP51-201ENST00000364750 119 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 SNORD63-201ENST00000384262 68 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 MIR208B-201ENST00000401172 77 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 MIR320B2-201ENST00000408479 138 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 RNA5SP201-201ENST00000410316 124 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 RPL21P38-201ENST00000418090 167 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 AC097463.2-201ENST00000421074 142 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 RPS3P1-201ENST00000456781 192 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 AL121594.1-201ENST00000475906 575 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 AL049830.2-201ENST00000480072 201 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 RNU2-27P-201ENST00000516185 142 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 AC023824.2-201ENST00000566185 400 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 PCGEM1.1-201ENST00000613431 131 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 U6.98-201ENST00000637157 84 ntBASIC3.4□□□□□ -1.87
PCDHA9Q9Y5H5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 AP003122.5-201ENST00000527668 3766 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 PWAR6-201ENST00000552334 4618 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 RNU6-873P-201ENST00000363833 107 ntBASIC3.39□□□□□ -1.87
PCDHA9Q9Y5H5 Y_RNA.350-201ENST00000365409 98 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms