Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.67□□□□□ -2.14
RSPO3Q9BXY4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 Y_RNA.303-201ENST00000364998 94 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 RNU6-877P-201ENST00000383868 107 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 RNU6-658P-201ENST00000384606 106 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 MIR518D-201ENST00000385014 87 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 RNU6-607P-201ENST00000411283 108 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 RNA5SP270-201ENST00000411361 118 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 RPL23AP36-201ENST00000413895 458 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 SNRPEP10-201ENST00000420249 274 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AL358453.1-201ENST00000422522 250 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AL121601.2-201ENST00000438019 707 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AC004383.1-201ENST00000438135 289 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 HMGN2P26-201ENST00000463169 339 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AC083904.1-201ENST00000487828 231 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AC104136.1-201ENST00000512969 394 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 Y_RNA.665-201ENST00000516177 98 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 RNU6-358P-201ENST00000516564 75 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 MTND4P7-201ENST00000523876 130 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AC023050.3-201ENST00000541142 333 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AC090115.3-201ENST00000553218 849 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 MIR4801-201ENST00000582704 82 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AC078899.2-201ENST00000595282 212 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AC011494.1-201ENST00000596454 237 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 CTHRC1P1-201ENST00000605383 469 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AC092807.2-201ENST00000609367 243 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AC138627.2-201ENST00000624202 601 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 AC090617.10-201ENST00000624308 134 ntBASIC1.66□□□□□ -2.14
RSPO3Q9BXY4 Y_RNA.231-201ENST00000364358 102 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 SNORD14B-201ENST00000364533 90 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 RNU6-395P-201ENST00000365662 106 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 Y_RNA.399-201ENST00000383955 105 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 MIR676-201ENST00000390702 67 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 SNORD37.1-201ENST00000390968 65 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 Y_RNA.623-201ENST00000411128 95 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC016831.2-201ENST00000417179 352 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 PGBD4P6-201ENST00000421501 610 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 ERLEC1P1-201ENST00000433806 578 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC124916.1-201ENST00000444020 547 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 PRPS1P1-201ENST00000445305 876 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 snoU109.2-201ENST00000459316 135 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 RPL37P6-201ENST00000460682 294 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC117503.1-201ENST00000472241 394 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC011005.2-201ENST00000487324 359 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC068781.1-201ENST00000488231 618 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC116353.2-201ENST00000505332 712 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC108729.3-201ENST00000513484 108 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 LRRC34P2-201ENST00000514850 553 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 RNU2-44P-201ENST00000516795 194 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 SNORA25.17-201ENST00000517184 124 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AF235103.2-201ENST00000525753 346 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 CENPUP1-201ENST00000526649 1202 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC005261.5-201ENST00000596280 355 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC002044.1-201ENST00000606707 158 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC022418.1-201ENST00000624118 445 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 AC004520.1-201ENST00000608362 1413 ntBASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
RSPO3Q9BXY4 CASC19-280ENST00000642102 1351 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 Y_RNA.86-201ENST00000363020 111 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 RNY3P14-201ENST00000384309 102 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 RNU6-434P-201ENST00000384376 107 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 Y_RNA.573-201ENST00000384763 105 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 MT-TL1-201ENST00000386347 75 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 RNA5SP219-201ENST00000390940 113 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 POLHP1-201ENST00000411806 470 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 RNU7-167P-201ENST00000459160 62 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 RNU6-1208P-201ENST00000459588 107 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 AC026801.1-201ENST00000497178 464 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 MTCO2P30-201ENST00000503662 364 ntBASIC1.64□□□□□ -2.15
RSPO3Q9BXY4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms