Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-1159P-201ENST00000362933 107 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 MIR628-201ENST00000385229 95 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AC114482.1-201ENST00000418010 247 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 RPL21P40-201ENST00000428586 483 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AC096644.2-201ENST00000429278 159 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 OR2AQ1P-201ENST00000451972 200 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 RNU7-87P-201ENST00000459343 62 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AC022616.4-201ENST00000522985 181 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 UBL5P2-201ENST00000583788 219 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 RPS15AP11-201ENST00000594193 385 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AC104695.3-201ENST00000604052 296 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AC087588.2-201ENST00000617667 426 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AC008121.3-201ENST00000618726 433 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 SCARNA4-201ENST00000629045 128 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AC243829.7-201ENST00000633081 225 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AL021368.2-201ENST00000606125 5352 ntBASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 RNA5SP374-201ENST00000362939 125 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 SNORD114-19-201ENST00000363072 75 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 RNU6-799P-201ENST00000363567 107 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 RNY3P11-201ENST00000364153 102 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 SNORA29-201ENST00000384183 140 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 SNORD15B-201ENST00000384714 146 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 Y_RNA.645-201ENST00000391229 102 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 AL356057.3-201ENST00000402607 340 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 AL358453.1-201ENST00000422522 250 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 MTCO3P29-201ENST00000432119 779 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 MTND3P2-201ENST00000438452 342 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 AC009296.1-201ENST00000443146 155 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 OSTCP8-201ENST00000445117 448 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 AC112492.4-201ENST00000456549 352 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 RNU6-911P-201ENST00000516523 104 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 FAM35CP-201ENST00000554755 2470 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 AC021231.3-201ENST00000558497 370 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 MIR5188-201ENST00000583467 113 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 RPS29P30-201ENST00000600975 111 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 AC124312.5-201ENST00000604451 268 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 RMST_6.1-201ENST00000611980 203 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 uc_338.14-201ENST00000613162 166 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 U2.1-201ENST00000618978 145 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 AP000560.1-201ENST00000624150 1937 ntBASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.89□□□□□ -1.95
CTHRC1Q96CG8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 Y_RNA.152-201ENST00000363578 100 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 U3.13-201ENST00000364804 214 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 Y_RNA.380-201ENST00000365663 111 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AL133475.1-201ENST00000404414 305 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 Y_RNA.592-201ENST00000410274 109 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AC004383.1-201ENST00000438135 289 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AC009969.1-201ENST00000438726 172 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 MTCO3P8-201ENST00000453691 755 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AC087477.1-201ENST00000465747 340 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 RPL30P1-201ENST00000488676 339 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AC093852.1-201ENST00000503587 266 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 RNU6-1046P-201ENST00000516538 107 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 MIR2355-201ENST00000517199 87 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AC109329.1-201ENST00000518744 317 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AC068657.1-201ENST00000520807 306 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 RPL23AP88-201ENST00000605759 454 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AC004832.5-201ENST00000608677 401 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AL359198.2-201ENST00000611836 194 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 AC138305.3-201ENST00000624988 240 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 MAPK10-322ENST00000641485 4530 ntBASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CTHRC1Q96CG8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 AC073325.2-201ENST00000339545 159 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 RNU6-1285P-201ENST00000363480 105 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 SNORD115-32-201ENST00000364079 82 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 RNU4-56P-201ENST00000364700 142 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 MIR32-201ENST00000384965 70 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 MIR153-2-201ENST00000385225 87 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 RNU6-823P-201ENST00000391042 103 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 AL358176.2-201ENST00000425769 204 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 Z82188.1-201ENST00000436709 154 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 CHEK2P4-201ENST00000450340 246 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 RPS27P26-201ENST00000494583 239 ntBASIC2.87□□□□□ -1.95
CTHRC1Q96CG8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms