Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNU6-769P-201ENST00000384407 104 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
H3F3AP84243 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.63□□□□□ -2.31
H3F3AP84243 AL591043.1-201ENST00000432461 424 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 AC007969.2-201ENST00000441891 191 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 MTND3P5-201ENST00000512798 333 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 AC074344.1-201ENST00000512823 224 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 FABP5P5-201ENST00000515537 406 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 RNA5SP384-201ENST00000516615 116 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 AC115990.1-201ENST00000526957 301 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 MIR544B-201ENST00000582372 78 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 BCRP9-201ENST00000605312 388 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 RNU6-88P-201ENST00000606801 100 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 AC072039.2-201ENST00000608883 439 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 AC104073.3-201ENST00000610942 955 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 AL359547.2-201ENST00000615810 418 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
H3F3AP84243 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.63□□□□□ -2.31
H3F3AP84243 RNU6-960P-201ENST00000364056 120 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 SNORA32.2-201ENST00000384049 122 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
H3F3AP84243 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 AC069257.2-201ENST00000441819 155 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 BTBD7P2-201ENST00000441962 620 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.62□□□□□ -2.31
H3F3AP84243 SNRPFP3-201ENST00000457792 225 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 RPS29P1-201ENST00000465274 159 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 PDCD5P2-201ENST00000507570 312 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 RNU6-197P-201ENST00000516680 100 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 AC013828.2-201ENST00000532487 235 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 MIR4709-201ENST00000577272 72 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 SNORA59B-202ENST00000578183 701 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 MIR4653-201ENST00000585107 83 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 AC110760.3-201ENST00000598794 467 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 AC068700.1-201ENST00000565862 3754 ntBASIC0.62□□□□□ -2.31
H3F3AP84243 RNU6-78P-201ENST00000362897 107 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 RNU6-527P-201ENST00000363425 104 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 RNU6-413P-201ENST00000384115 107 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 SNORA12.2-201ENST00000391040 156 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.61□□□□□ -2.31
H3F3AP84243 MTND4P20-201ENST00000424125 869 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 AC073910.1-201ENST00000445047 438 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.61□□□□□ -2.31
H3F3AP84243 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.61□□□□□ -2.31
H3F3AP84243 RNU6-165P-201ENST00000517170 99 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.61□□□□□ -2.31
H3F3AP84243 AC136628.3-201ENST00000521868 290 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 DEFB108E-201ENST00000524692 240 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 AC023050.2-201ENST00000544968 387 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 HSPE1P4-201ENST00000550617 308 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.61□□□□□ -2.31
H3F3AP84243 AC068620.3-201ENST00000602749 560 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 MIR6788-201ENST00000618842 66 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 AC097372.5-201ENST00000623665 376 ntBASIC0.61□□□□□ -2.31
H3F3AP84243 HSBP1P2-201ENST00000299671 229 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 Y_RNA.192-201ENST00000363977 102 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.6□□□□□ -2.31
H3F3AP84243 AC007327.1-201ENST00000447461 264 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.6□□□□□ -2.31
H3F3AP84243 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.6□□□□□ -2.31
H3F3AP84243 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.6□□□□□ -2.31
H3F3AP84243 RNU7-34P-201ENST00000459394 64 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 SNORD124-201ENST00000459577 104 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.6□□□□□ -2.31
H3F3AP84243 RNU2-10P-201ENST00000516375 211 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.6□□□□□ -2.31
H3F3AP84243 AL442163.3-201ENST00000554110 156 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 AC109446.1-201ENST00000566172 220 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.6□□□□□ -2.31
H3F3AP84243 AC108747.1-201ENST00000609508 535 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.6□□□□□ -2.31
H3F3AP84243 AC131159.1-201ENST00000621854 213 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 RMST_7.1-201ENST00000621935 268 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 AL356596.1-201ENST00000624230 379 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.6□□□□□ -2.31
H3F3AP84243 SNORD98-201ENST00000636377 67 ntBASIC0.6□□□□□ -2.31
H3F3AP84243 Y_RNA.226-201ENST00000364337 114 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 Y_RNA.238-201ENST00000364441 102 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 SNORD114-24-201ENST00000365029 72 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 RNU5E-7P-201ENST00000365290 117 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 SNORA4.2-201ENST00000365313 147 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 MIR608-201ENST00000384820 100 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 MIR578-201ENST00000384828 96 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 MIR548J-201ENST00000408833 112 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 USP9YP14-201ENST00000430663 563 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.59□□□□□ -2.31
H3F3AP84243 AC116353.3-201ENST00000511215 249 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 RNU6-1041P-201ENST00000516254 102 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 AC090142.3-201ENST00000519012 385 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 MTCO2P2-201ENST00000591258 225 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 AC016727.2-201ENST00000603988 621 ntBASIC0.59□□□□□ -2.31
H3F3AP84243 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
H3F3AP84243 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
H3F3AP84243 SNORA63.3-201ENST00000362682 132 ntBASIC0.58□□□□□ -2.32
H3F3AP84243 RNU6-723P-201ENST00000383973 107 ntBASIC0.58□□□□□ -2.32
H3F3AP84243 Y_RNA.472-201ENST00000384322 102 ntBASIC0.58□□□□□ -2.32
H3F3AP84243 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms