Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.31□□□□□ -2.2
CLDN6P56747 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CLDN6P56747 U8.3-201ENST00000363321 132 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 SNORD32B-201ENST00000364460 84 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 RNU6-116P-201ENST00000384042 109 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 Y_RNA.576-201ENST00000384781 102 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 RNU2-3P-201ENST00000410144 191 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 RNU2-8P-201ENST00000410727 190 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 RNU6-607P-201ENST00000411283 108 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AL356583.2-201ENST00000426536 280 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 HMGN2P18-201ENST00000450680 270 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.31□□□□□ -2.2
CLDN6P56747 AC145146.1-201ENST00000496370 254 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AC114801.2-201ENST00000503825 781 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AC116562.3-201ENST00000506136 177 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AC025465.3-201ENST00000510570 311 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.31□□□□□ -2.2
CLDN6P56747 SCARNA24.1-201ENST00000516465 137 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.31□□□□□ -2.2
CLDN6P56747 AC068587.5-201ENST00000528506 175 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AC016957.1-201ENST00000534895 309 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AC005786.1-201ENST00000588553 154 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.31□□□□□ -2.2
CLDN6P56747 AC008751.2-201ENST00000597885 980 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AC123912.5-201ENST00000605470 343 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.31□□□□□ -2.2
CLDN6P56747 MIR6515-201ENST00000619843 57 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 Z69720.2-201ENST00000624755 279 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 AC099654.13-201ENST00000639774 207 ntBASIC1.31□□□□□ -2.2
CLDN6P56747 RNU4-15P-201ENST00000362613 141 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 Y_RNA.67-201ENST00000362870 100 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 RNU6-105P-201ENST00000363909 104 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 RNU1-93P-201ENST00000364704 169 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 HSFY7P-201ENST00000432672 318 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 MTATP6P16-201ENST00000434543 526 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 HSFY8P-201ENST00000437934 318 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 AL357134.1-201ENST00000445848 426 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 ZNF114P1-201ENST00000453500 292 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 HSFY5P-201ENST00000453726 309 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 SNRPGP7-201ENST00000469016 106 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 MTCYBP18-201ENST00000501056 747 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.3□□□□□ -2.2
CLDN6P56747 AC104806.1-201ENST00000508720 308 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 MTND3P5-201ENST00000512798 333 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 AC074344.1-201ENST00000512823 224 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 Y_RNA.675-201ENST00000516389 149 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 AC022878.1-201ENST00000530684 149 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 AC087883.1-201ENST00000551882 391 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 RPL21P5-201ENST00000554662 472 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDN6P56747 SUB1P4-201ENST00000566062 339 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.3□□□□□ -2.2
CLDN6P56747 AC005771.1-201ENST00000585581 349 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 AP001485.1-201ENST00000604799 199 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 MIR7844-201ENST00000616161 122 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 MIR6779-201ENST00000617283 64 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 SNORD98-201ENST00000636377 67 ntBASIC1.3□□□□□ -2.2
CLDN6P56747 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CLDN6P56747 RNU6-1285P-201ENST00000363480 105 ntBASIC1.29□□□□□ -2.2
CLDN6P56747 CYCSP33-201ENST00000414485 327 ntBASIC1.29□□□□□ -2.2
CLDN6P56747 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.29□□□□□ -2.2
CLDN6P56747 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.29□□□□□ -2.2
CLDN6P56747 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.29□□□□□ -2.2
CLDN6P56747 MTND2P4-201ENST00000445034 1004 ntBASIC1.29□□□□□ -2.2
CLDN6P56747 EPS15P1-201ENST00000448836 336 ntBASIC1.29□□□□□ -2.2
CLDN6P56747 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CLDN6P56747 snoU13.9-201ENST00000458927 103 ntBASIC1.29□□□□□ -2.2
CLDN6P56747 MTND2P14-201ENST00000482139 351 ntBASIC1.29□□□□□ -2.2
CLDN6P56747 AC005741.1-201ENST00000511094 432 ntBASIC1.29□□□□□ -2.2
CLDN6P56747 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CLDN6P56747 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN6P56747 AC002400.1-201ENST00000569310 726 ntBASIC1.29□□□□□ -2.2
CLDN6P56747 AC009159.2-201ENST00000617603 606 ntBASIC1.29□□□□□ -2.2
CLDN6P56747 PVT1_3.1-201ENST00000620853 95 ntBASIC1.29□□□□□ -2.2
CLDN6P56747 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CLDN6P56747 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CLDN6P56747 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CLDN6P56747 Y_RNA.332-201ENST00000365271 113 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 SNORD115-7-201ENST00000365306 82 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 RNU6-45P-201ENST00000384471 107 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 RNU6-584P-201ENST00000410350 95 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 OR6C66P-201ENST00000414917 930 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 AC007098.1-201ENST00000420122 367 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.28□□□□□ -2.2
CLDN6P56747 MTND1P18-201ENST00000448191 573 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 RNU1-131P-201ENST00000458943 161 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 AC093852.1-201ENST00000503587 266 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 AC022447.4-201ENST00000504053 364 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.28□□□□□ -2.2
CLDN6P56747 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.28□□□□□ -2.2
CLDN6P56747 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.28□□□□□ -2.2
CLDN6P56747 MIR5094-201ENST00000578766 85 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 MIR4422-201ENST00000581938 83 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CLDN6P56747 AL133173.2-201ENST00000614270 90 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 AC138649.3-201ENST00000622154 254 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 AC022513.1-201ENST00000624512 117 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 MIR6767-201ENST00000637302 66 ntBASIC1.28□□□□□ -2.2
CLDN6P56747 MTND5P10-201ENST00000603719 1809 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms