Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RAP1BP3-201ENST00000407180 549 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.4□□□□□ -2.03
HNF4AP41235 EDDM3CP-201ENST00000415977 425 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 PGBD4P6-201ENST00000421501 610 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.4□□□□□ -2.03
HNF4AP41235 RPS3P1-201ENST00000456781 192 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 TRBVA-201ENST00000498804 316 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 FGF7P4-201ENST00000509595 295 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.4□□□□□ -2.03
HNF4AP41235 RN7SKP24-201ENST00000515888 284 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 RNA5SP320-201ENST00000516263 124 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 Y_RNA.682-201ENST00000516457 100 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 RNA5SP148-201ENST00000516527 94 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 AC109329.1-201ENST00000518744 317 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 IGLV3-17-201ENST00000519099 244 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 AC105029.1-201ENST00000520250 669 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 RNU6-323P-201ENST00000521915 107 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 AP000889.2-201ENST00000532684 490 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 CR383656.8-201ENST00000549046 145 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.4□□□□□ -2.03
HNF4AP41235 AC243960.4-201ENST00000600532 288 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.4□□□□□ -2.03
HNF4AP41235 APOOP1-201ENST00000604695 592 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 AL132765.2-201ENST00000610812 351 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 AL137847.3-201ENST00000611521 109 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 uc_338.15-201ENST00000615470 191 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 MIR6817-201ENST00000615588 66 ntBASIC2.4□□□□□ -2.03
HNF4AP41235 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.4□□□□□ -2.03
HNF4AP41235 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.4□□□□□ -2.03
HNF4AP41235 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.4□□□□□ -2.03
HNF4AP41235 Y_RNA.61-201ENST00000362835 102 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 RNU6-942P-201ENST00000363002 107 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 RNU4-73P-201ENST00000363164 141 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 SNORA41-201ENST00000384675 132 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 TOMM20P4-201ENST00000427861 435 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 MTND3P23-201ENST00000431980 347 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.39□□□□□ -2.03
HNF4AP41235 MTND4LP16-201ENST00000440828 295 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 RPL32P28-201ENST00000443577 397 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 snoU109.2-201ENST00000459316 135 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 MTND3P22-201ENST00000510932 243 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.39□□□□□ -2.03
HNF4AP41235 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.39□□□□□ -2.03
HNF4AP41235 RNU6-277P-201ENST00000516272 106 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 Y_RNA.691-201ENST00000516611 103 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 RNU6-1332P-201ENST00000516666 104 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 RNU6-566P-201ENST00000516790 107 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 SNORA31.25-201ENST00000517242 134 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.39□□□□□ -2.03
HNF4AP41235 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.39□□□□□ -2.03
HNF4AP41235 AC121758.2-201ENST00000553271 193 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.39□□□□□ -2.03
HNF4AP41235 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 RPL30P11-203ENST00000598995 310 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 AC123912.5-201ENST00000605470 343 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 uc_338.5-201ENST00000611839 155 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 AL138726.1-201ENST00000614873 333 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 AL359314.1-201ENST00000616913 261 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.39□□□□□ -2.03
HNF4AP41235 RMST_7.1-201ENST00000621935 268 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 AL359697.1-201ENST00000624879 587 ntBASIC2.39□□□□□ -2.03
HNF4AP41235 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
HNF4AP41235 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
HNF4AP41235 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HNF4AP41235 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HNF4AP41235 Y_RNA.212-201ENST00000364177 102 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 Y_RNA.339-201ENST00000365325 102 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HNF4AP41235 SNORD116-11-201ENST00000383882 92 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 Y_RNA.474-201ENST00000384341 102 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 MIR634-201ENST00000385208 97 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.38□□□□□ -2.03
HNF4AP41235 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.38□□□□□ -2.03
HNF4AP41235 RPL23AP45-201ENST00000476406 468 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.38□□□□□ -2.03
HNF4AP41235 RNA5SP137-201ENST00000516833 135 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.38□□□□□ -2.03
HNF4AP41235 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.38□□□□□ -2.03
HNF4AP41235 AC105137.2-201ENST00000569073 466 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.38□□□□□ -2.03
HNF4AP41235 AC005668.1-201ENST00000571142 476 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 MIR4529-201ENST00000578110 78 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.38□□□□□ -2.03
HNF4AP41235 AC023043.2-201ENST00000589678 1026 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 AC007229.1-201ENST00000590455 412 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.38□□□□□ -2.03
HNF4AP41235 AC006023.1-201ENST00000603944 259 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 RNU6-85P-201ENST00000605989 107 ntBASIC2.38□□□□□ -2.03
HNF4AP41235 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.38□□□□□ -2.03
HNF4AP41235 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HNF4AP41235 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HNF4AP41235 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
HNF4AP41235 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HNF4AP41235 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.37□□□□□ -2.03
HNF4AP41235 Y_RNA.135-201ENST00000363439 95 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 RNU6-1013P-201ENST00000384180 107 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 Y_RNA.509-201ENST00000384506 99 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 Y_RNA.510-201ENST00000384511 114 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 MIR186-201ENST00000384988 86 ntBASIC2.37□□□□□ -2.03
HNF4AP41235 SNORD73A-201ENST00000386062 65 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms