Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC009831.4-201ENST00000620744 325 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 IGHVIII-44-202ENST00000636235 289 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HOXD13P35453 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
HOXD13P35453 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HOXD13P35453 Y_RNA.6-201ENST00000362350 114 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 RNU4-12P-201ENST00000365233 139 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 RNU6-877P-201ENST00000383868 107 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 RNU4-53P-201ENST00000410828 140 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 SRIP2-201ENST00000428470 166 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 NDUFA5P4-201ENST00000436704 385 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXD13P35453 AL031659.1-201ENST00000447075 539 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 AC083904.1-201ENST00000487828 231 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 AC018868.1-201ENST00000491307 315 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 AC008628.2-201ENST00000502605 298 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 RNA5SP24-201ENST00000516478 95 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 RNU6-612P-201ENST00000516909 102 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 IGLV3-17-201ENST00000519099 244 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXD13P35453 PRELID2P1-201ENST00000552837 301 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXD13P35453 MIR5002-201ENST00000584713 97 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HOXD13P35453 MTND4P23-201ENST00000447723 1363 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 ZNF720P1-201ENST00000562403 1939 ntBASIC2.44□□□□□ -2.02
HOXD13P35453 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXD13P35453 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXD13P35453 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXD13P35453 RNU6-451P-201ENST00000362921 107 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 Y_RNA.100-201ENST00000363141 102 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 SNORD113-7-201ENST00000363762 77 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 RNU6-1090P-201ENST00000364065 94 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 RNU6-522P-201ENST00000364497 107 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 RNU6-128P-201ENST00000383976 107 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 Y_RNA.450-201ENST00000384198 113 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 Y_RNA.504-201ENST00000384481 104 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 Y_RNA.516-201ENST00000384541 124 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 MIR1294-201ENST00000408503 142 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 GPM6BP3-201ENST00000442797 145 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 AL137159.1-201ENST00000452808 512 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 RPL9P9-202ENST00000466501 579 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 AC132942.1-201ENST00000486753 483 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXD13P35453 RNU7-193P-201ENST00000516723 65 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.43□□□□□ -2.02
HOXD13P35453 AC104576.1-201ENST00000524225 88 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 AC121758.2-201ENST00000553271 193 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 AC021231.3-201ENST00000558497 370 ntBASIC2.43□□□□□ -2.02
HOXD13P35453 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXD13P35453 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXD13P35453 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXD13P35453 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXD13P35453 RNU6-227P-201ENST00000362865 103 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 RNU6-944P-201ENST00000364023 107 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HOXD13P35453 SNORD23.1-201ENST00000408212 104 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXD13P35453 EIF1AXP1-201ENST00000419267 435 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXD13P35453 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXD13P35453 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXD13P35453 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HOXD13P35453 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXD13P35453 AC104435.1-201ENST00000483483 166 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 AC104564.1-201ENST00000493028 407 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 AC145146.1-201ENST00000496370 254 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 RNU6-1332P-201ENST00000516666 104 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 AC026371.1-201ENST00000551867 419 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 RPS3AP23-202ENST00000574601 686 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 BNIP3P25-201ENST00000596023 559 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 AL031274.2-201ENST00000599419 203 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 AC064836.2-201ENST00000609491 462 ntBASIC2.42□□□□□ -2.02
HOXD13P35453 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXD13P35453 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXD13P35453 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HOXD13P35453 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXD13P35453 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.41□□□□□ -2.02
HOXD13P35453 AC009541.1-201ENST00000438279 2662 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXD13P35453 Y_RNA.167-201ENST00000363735 109 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXD13P35453 RNU6-933P-201ENST00000384424 107 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 Y_RNA.530-201ENST00000384587 101 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 Y_RNA.554-201ENST00000384672 102 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 MIR144-201ENST00000384886 86 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 SNORA26.3-201ENST00000391119 136 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 Y_RNA.615-201ENST00000410769 117 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 MTND1P23-201ENST00000416931 372 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 AC009161.1-201ENST00000417306 376 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 IFNA20P-201ENST00000436840 528 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.41□□□□□ -2.02
HOXD13P35453 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.41□□□□□ -2.02
HOXD13P35453 MTCO1P29-201ENST00000496868 288 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 AC025465.4-201ENST00000513422 638 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 SCOCP1-201ENST00000554676 349 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 MIR4529-201ENST00000578110 78 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 AP000654.2-201ENST00000605633 586 ntBASIC2.41□□□□□ -2.02
HOXD13P35453 AL136221.1-201ENST00000621449 509 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms