Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 Z75746.1-201ENST00000440243 2080 ntBASIC2.35□□□□□ -2.03
CDH3P22223 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CDH3P22223 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDH3P22223 RNU6-1010P-201ENST00000362757 107 ntBASIC2.34□□□□□ -2.03
CDH3P22223 Y_RNA.212-201ENST00000364177 102 ntBASIC2.34□□□□□ -2.03
CDH3P22223 RNU6-128P-201ENST00000383976 107 ntBASIC2.34□□□□□ -2.03
CDH3P22223 RNU6-214P-201ENST00000384130 107 ntBASIC2.34□□□□□ -2.03
CDH3P22223 RNU6-692P-201ENST00000384496 107 ntBASIC2.34□□□□□ -2.03
CDH3P22223 MIR218-1-201ENST00000384999 110 ntBASIC2.34□□□□□ -2.03
CDH3P22223 RNA5SP390-201ENST00000410191 113 ntBASIC2.34□□□□□ -2.03
CDH3P22223 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH3P22223 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH3P22223 AC234781.5-201ENST00000508429 271 ntBASIC2.34□□□□□ -2.03
CDH3P22223 SMURF2P1-201ENST00000514992 481 ntBASIC2.34□□□□□ -2.03
CDH3P22223 RNA5SP112-201ENST00000515937 99 ntBASIC2.34□□□□□ -2.03
CDH3P22223 RNU6-1088P-201ENST00000516850 104 ntBASIC2.34□□□□□ -2.03
CDH3P22223 SCARNA3-201ENST00000517097 143 ntBASIC2.34□□□□□ -2.03
CDH3P22223 RN7SKP256-201ENST00000517201 314 ntBASIC2.34□□□□□ -2.03
CDH3P22223 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH3P22223 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH3P22223 SCOCP1-201ENST00000554676 349 ntBASIC2.34□□□□□ -2.03
CDH3P22223 MIR3199-1-201ENST00000582434 88 ntBASIC2.34□□□□□ -2.03
CDH3P22223 AC023043.2-201ENST00000589678 1026 ntBASIC2.34□□□□□ -2.03
CDH3P22223 BNIP3P16-201ENST00000589779 534 ntBASIC2.34□□□□□ -2.03
CDH3P22223 VN1R107P-201ENST00000601784 209 ntBASIC2.34□□□□□ -2.03
CDH3P22223 AC024581.2-201ENST00000619986 252 ntBASIC2.34□□□□□ -2.03
CDH3P22223 AC009033.1-201ENST00000624279 431 ntBASIC2.34□□□□□ -2.03
CDH3P22223 AC241585.2-209ENST00000638217 143 ntBASIC2.34□□□□□ -2.03
CDH3P22223 AL596028.1-201ENST00000326971 197 ntBASIC2.33□□□□□ -2.04
CDH3P22223 RNA5SP289-201ENST00000362332 137 ntBASIC2.33□□□□□ -2.04
CDH3P22223 Y_RNA.40-201ENST00000362645 93 ntBASIC2.33□□□□□ -2.04
CDH3P22223 RNU1-72P-201ENST00000362976 153 ntBASIC2.33□□□□□ -2.04
CDH3P22223 RNU6-486P-201ENST00000363116 107 ntBASIC2.33□□□□□ -2.04
CDH3P22223 XGY1-201ENST00000381172 446 ntBASIC2.33□□□□□ -2.04
CDH3P22223 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDH3P22223 AC138393.2-201ENST00000414742 246 ntBASIC2.33□□□□□ -2.04
CDH3P22223 CYCSP48-201ENST00000417124 323 ntBASIC2.33□□□□□ -2.04
CDH3P22223 AC097463.2-201ENST00000421074 142 ntBASIC2.33□□□□□ -2.04
CDH3P22223 AL590632.1-201ENST00000424289 371 ntBASIC2.33□□□□□ -2.04
CDH3P22223 UBE2V1P4-201ENST00000425374 344 ntBASIC2.33□□□□□ -2.04
CDH3P22223 MTCO3P46-201ENST00000425787 232 ntBASIC2.33□□□□□ -2.04
CDH3P22223 WARS2P1-201ENST00000429678 537 ntBASIC2.33□□□□□ -2.04
CDH3P22223 SNAP23P1-201ENST00000433229 246 ntBASIC2.33□□□□□ -2.04
CDH3P22223 IFNA20P-201ENST00000436840 528 ntBASIC2.33□□□□□ -2.04
CDH3P22223 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH3P22223 RPL7P12-201ENST00000446719 750 ntBASIC2.33□□□□□ -2.04
CDH3P22223 AMD1P1-201ENST00000457220 922 ntBASIC2.33□□□□□ -2.04
CDH3P22223 RNU6-329P-201ENST00000459618 107 ntBASIC2.33□□□□□ -2.04
CDH3P22223 AC025465.4-201ENST00000513422 638 ntBASIC2.33□□□□□ -2.04
CDH3P22223 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH3P22223 SNORA20.3-201ENST00000516880 132 ntBASIC2.33□□□□□ -2.04
CDH3P22223 AC026371.1-201ENST00000551867 419 ntBASIC2.33□□□□□ -2.04
CDH3P22223 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH3P22223 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.33□□□□□ -2.04
CDH3P22223 MIR4742-201ENST00000581069 85 ntBASIC2.33□□□□□ -2.04
CDH3P22223 AC096772.1-201ENST00000609146 564 ntBASIC2.33□□□□□ -2.04
CDH3P22223 AC093913.1-201ENST00000614178 329 ntBASIC2.33□□□□□ -2.04
CDH3P22223 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.33□□□□□ -2.04
CDH3P22223 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH3P22223 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDH3P22223 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH3P22223 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CDH3P22223 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH3P22223 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH3P22223 SNORD114-19-201ENST00000363072 75 ntBASIC2.32□□□□□ -2.04
CDH3P22223 RNU6-529P-201ENST00000363383 104 ntBASIC2.32□□□□□ -2.04
CDH3P22223 Y_RNA.301-201ENST00000364990 103 ntBASIC2.32□□□□□ -2.04
CDH3P22223 SNORD116-11-201ENST00000383882 92 ntBASIC2.32□□□□□ -2.04
CDH3P22223 SNORA67.4-201ENST00000384688 142 ntBASIC2.32□□□□□ -2.04
CDH3P22223 RNU2-23P-201ENST00000410545 195 ntBASIC2.32□□□□□ -2.04
CDH3P22223 AC138623.1-201ENST00000418060 216 ntBASIC2.32□□□□□ -2.04
CDH3P22223 RPL21P111-201ENST00000418453 477 ntBASIC2.32□□□□□ -2.04
CDH3P22223 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH3P22223 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH3P22223 BX276092.3-201ENST00000424182 230 ntBASIC2.32□□□□□ -2.04
CDH3P22223 RPS15AP10-201ENST00000432472 382 ntBASIC2.32□□□□□ -2.04
CDH3P22223 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH3P22223 MTND1P11-201ENST00000456661 876 ntBASIC2.32□□□□□ -2.04
CDH3P22223 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH3P22223 AC080013.2-201ENST00000460866 323 ntBASIC2.32□□□□□ -2.04
CDH3P22223 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH3P22223 RPL30P12-201ENST00000474666 353 ntBASIC2.32□□□□□ -2.04
CDH3P22223 RPL22P13-201ENST00000493291 347 ntBASIC2.32□□□□□ -2.04
CDH3P22223 AC008526.1-201ENST00000509149 338 ntBASIC2.32□□□□□ -2.04
CDH3P22223 RNU6-273P-201ENST00000516937 96 ntBASIC2.32□□□□□ -2.04
CDH3P22223 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH3P22223 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.32□□□□□ -2.04
CDH3P22223 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH3P22223 AC026464.5-201ENST00000562497 722 ntBASIC2.32□□□□□ -2.04
CDH3P22223 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH3P22223 AC011712.1-201ENST00000588959 234 ntBASIC2.32□□□□□ -2.04
CDH3P22223 AL590808.1-201ENST00000618696 141 ntBASIC2.32□□□□□ -2.04
CDH3P22223 AL159153.1-201ENST00000619688 317 ntBASIC2.32□□□□□ -2.04
CDH3P22223 AL133216.2-202ENST00000634512 349 ntBASIC2.32□□□□□ -2.04
CDH3P22223 MTND4P23-201ENST00000447723 1363 ntBASIC2.32□□□□□ -2.04
CDH3P22223 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH3P22223 ZNF720P1-201ENST00000562403 1939 ntBASIC2.31□□□□□ -2.04
CDH3P22223 Y_RNA.303-201ENST00000364998 94 ntBASIC2.31□□□□□ -2.04
CDH3P22223 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDH3P22223 SNORA41-201ENST00000384675 132 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms