Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 Y_RNA.509-201ENST00000384506 99 ntBASIC2.63□□□□□ -1.99
PCNAP12004 SNORD116-29-201ENST00000384516 83 ntBASIC2.63□□□□□ -1.99
PCNAP12004 RNU6-1050P-201ENST00000410388 107 ntBASIC2.63□□□□□ -1.99
PCNAP12004 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.63□□□□□ -1.99
PCNAP12004 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.63□□□□□ -1.99
PCNAP12004 AC236972.1-201ENST00000433225 199 ntBASIC2.63□□□□□ -1.99
PCNAP12004 SNORD5.1-201ENST00000458800 75 ntBASIC2.63□□□□□ -1.99
PCNAP12004 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.63□□□□□ -1.99
PCNAP12004 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.63□□□□□ -1.99
PCNAP12004 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.63□□□□□ -1.99
PCNAP12004 AC079598.5-201ENST00000547460 117 ntBASIC2.63□□□□□ -1.99
PCNAP12004 AC105137.2-201ENST00000569073 466 ntBASIC2.63□□□□□ -1.99
PCNAP12004 AC090616.3-201ENST00000582184 217 ntBASIC2.63□□□□□ -1.99
PCNAP12004 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.63□□□□□ -1.99
PCNAP12004 AC011494.1-201ENST00000596454 237 ntBASIC2.63□□□□□ -1.99
PCNAP12004 AL356575.1-201ENST00000603008 283 ntBASIC2.63□□□□□ -1.99
PCNAP12004 AP000654.2-201ENST00000605633 586 ntBASIC2.63□□□□□ -1.99
PCNAP12004 MIR8076-201ENST00000611401 83 ntBASIC2.63□□□□□ -1.99
PCNAP12004 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.63□□□□□ -1.99
PCNAP12004 SNORA43.4-201ENST00000629559 138 ntBASIC2.63□□□□□ -1.99
PCNAP12004 AL669831.3-213ENST00000636676 183 ntBASIC2.63□□□□□ -1.99
PCNAP12004 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.63□□□□□ -1.99
PCNAP12004 AC080128.1-201ENST00000474389 1917 ntBASIC2.63□□□□□ -1.99
PCNAP12004 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.63□□□□□ -1.99
PCNAP12004 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PCNAP12004 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
PCNAP12004 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.62□□□□□ -1.99
PCNAP12004 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PCNAP12004 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
PCNAP12004 RNU6-1010P-201ENST00000362757 107 ntBASIC2.62□□□□□ -1.99
PCNAP12004 Y_RNA.61-201ENST00000362835 102 ntBASIC2.62□□□□□ -1.99
PCNAP12004 RNU6-797P-201ENST00000363101 109 ntBASIC2.62□□□□□ -1.99
PCNAP12004 Y_RNA.387-201ENST00000383918 102 ntBASIC2.62□□□□□ -1.99
PCNAP12004 SNORA36A-201ENST00000384221 132 ntBASIC2.62□□□□□ -1.99
PCNAP12004 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PCNAP12004 AL138827.1-201ENST00000402666 306 ntBASIC2.62□□□□□ -1.99
PCNAP12004 RNU2-23P-201ENST00000410545 195 ntBASIC2.62□□□□□ -1.99
PCNAP12004 AC097463.2-201ENST00000421074 142 ntBASIC2.62□□□□□ -1.99
PCNAP12004 AC008267.5-201ENST00000424928 265 ntBASIC2.62□□□□□ -1.99
PCNAP12004 RPL30P4-201ENST00000429309 333 ntBASIC2.62□□□□□ -1.99
PCNAP12004 DAP3P1-201ENST00000441522 278 ntBASIC2.62□□□□□ -1.99
PCNAP12004 AL135938.1-201ENST00000443141 297 ntBASIC2.62□□□□□ -1.99
PCNAP12004 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.62□□□□□ -1.99
PCNAP12004 ACA59.1-201ENST00000515966 143 ntBASIC2.62□□□□□ -1.99
PCNAP12004 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.62□□□□□ -1.99
PCNAP12004 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.62□□□□□ -1.99
PCNAP12004 MRPS36P4-201ENST00000534436 298 ntBASIC2.62□□□□□ -1.99
PCNAP12004 HSPE1P4-201ENST00000550617 308 ntBASIC2.62□□□□□ -1.99
PCNAP12004 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCNAP12004 BNIP3P22-201ENST00000593399 556 ntBASIC2.62□□□□□ -1.99
PCNAP12004 AC078795.3-201ENST00000602913 472 ntBASIC2.62□□□□□ -1.99
PCNAP12004 AC073410.2-201ENST00000603240 332 ntBASIC2.62□□□□□ -1.99
PCNAP12004 AL356280.1-201ENST00000603614 379 ntBASIC2.62□□□□□ -1.99
PCNAP12004 AC096772.1-201ENST00000609146 564 ntBASIC2.62□□□□□ -1.99
PCNAP12004 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.62□□□□□ -1.99
PCNAP12004 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.62□□□□□ -1.99
PCNAP12004 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
PCNAP12004 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PCNAP12004 MTND4P29-201ENST00000503122 1372 ntBASIC2.61□□□□□ -1.99
PCNAP12004 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.61□□□□□ -1.99
PCNAP12004 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.61□□□□□ -1.99
PCNAP12004 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.61□□□□□ -1.99
PCNAP12004 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
PCNAP12004 Y_RNA.2-201ENST00000362330 96 ntBASIC2.61□□□□□ -1.99
PCNAP12004 RNU4-79P-201ENST00000362764 141 ntBASIC2.61□□□□□ -1.99
PCNAP12004 SNORD50.1-201ENST00000362987 71 ntBASIC2.61□□□□□ -1.99
PCNAP12004 RNU6-1188P-201ENST00000363795 107 ntBASIC2.61□□□□□ -1.99
PCNAP12004 SNORA25.6-201ENST00000364121 118 ntBASIC2.61□□□□□ -1.99
PCNAP12004 Y_RNA.384-201ENST00000383909 102 ntBASIC2.61□□□□□ -1.99
PCNAP12004 RNU6-1297P-201ENST00000384415 104 ntBASIC2.61□□□□□ -1.99
PCNAP12004 Y_RNA.504-201ENST00000384481 104 ntBASIC2.61□□□□□ -1.99
PCNAP12004 RNU6-1222P-201ENST00000384615 107 ntBASIC2.61□□□□□ -1.99
PCNAP12004 RNU6-331P-201ENST00000384724 107 ntBASIC2.61□□□□□ -1.99
PCNAP12004 MIR186-201ENST00000384988 86 ntBASIC2.61□□□□□ -1.99
PCNAP12004 MIR524-201ENST00000385242 87 ntBASIC2.61□□□□□ -1.99
PCNAP12004 SNORA75.4-201ENST00000391278 119 ntBASIC2.61□□□□□ -1.99
PCNAP12004 BTF3L4P2-201ENST00000392798 346 ntBASIC2.61□□□□□ -1.99
PCNAP12004 SNORA11.1-201ENST00000408133 129 ntBASIC2.61□□□□□ -1.99
PCNAP12004 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.61□□□□□ -1.99
PCNAP12004 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.61□□□□□ -1.99
PCNAP12004 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.61□□□□□ -1.99
PCNAP12004 AC140059.1-201ENST00000489238 361 ntBASIC2.61□□□□□ -1.99
PCNAP12004 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.61□□□□□ -1.99
PCNAP12004 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.61□□□□□ -1.99
PCNAP12004 RNA5SP384-201ENST00000516615 116 ntBASIC2.61□□□□□ -1.99
PCNAP12004 SNORA31.16-201ENST00000516773 139 ntBASIC2.61□□□□□ -1.99
PCNAP12004 Y_RNA.708-201ENST00000516950 96 ntBASIC2.61□□□□□ -1.99
PCNAP12004 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.61□□□□□ -1.99
PCNAP12004 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.61□□□□□ -1.99
PCNAP12004 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
PCNAP12004 AC018889.1-201ENST00000605372 397 ntBASIC2.61□□□□□ -1.99
PCNAP12004 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.61□□□□□ -1.99
PCNAP12004 AL449363.1-201ENST00000617815 186 ntBASIC2.61□□□□□ -1.99
PCNAP12004 AL159153.1-201ENST00000619688 317 ntBASIC2.61□□□□□ -1.99
PCNAP12004 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.61□□□□□ -1.99
PCNAP12004 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.6□□□□□ -1.99
PCNAP12004 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PCNAP12004 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PCNAP12004 MTND5P30-201ENST00000452896 1731 ntBASIC2.6□□□□□ -1.99
PCNAP12004 AC002543.1-201ENST00000299783 1954 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms