Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 EI24P2-201ENST00000397776 1076 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.44□□□□□ -1.86
SNRPA1P09661 TMEM167AP1-201ENST00000423409 219 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.44□□□□□ -1.86
SNRPA1P09661 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.44□□□□□ -1.86
SNRPA1P09661 IPO7P1-201ENST00000442031 636 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 AL513328.1-201ENST00000446460 224 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.44□□□□□ -1.86
SNRPA1P09661 RNA5SP310-201ENST00000459084 116 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 AP004217.1-201ENST00000480579 346 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 MTND4LP22-201ENST00000508209 276 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.44□□□□□ -1.86
SNRPA1P09661 HSBP1P1-201ENST00000555205 166 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 MIR4503-201ENST00000582187 83 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 AC013412.1-201ENST00000610687 192 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 MIR1244-1-201ENST00000612829 85 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 AC087588.2-201ENST00000617667 426 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 SCARNA4-202ENST00000625402 129 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 MIR1244-3-201ENST00000635744 85 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 MIR1244-2-201ENST00000636449 85 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 MIR1244-4-202ENST00000636813 85 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.44□□□□□ -1.86
SNRPA1P09661 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SNRPA1P09661 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.44□□□□□ -1.86
SNRPA1P09661 MTND5P9-201ENST00000503854 1755 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SNRPA1P09661 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SNRPA1P09661 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.43□□□□□ -1.86
SNRPA1P09661 MIR518D-201ENST00000385014 87 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 U3.37-201ENST00000408528 213 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 RPL26P27-201ENST00000414397 437 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.43□□□□□ -1.86
SNRPA1P09661 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.43□□□□□ -1.86
SNRPA1P09661 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.43□□□□□ -1.86
SNRPA1P09661 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.43□□□□□ -1.86
SNRPA1P09661 MTCYBP9-201ENST00000431021 303 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 AC098831.1-201ENST00000440661 216 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.43□□□□□ -1.86
SNRPA1P09661 HMGB3P8-201ENST00000449709 577 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 RPS29P27-201ENST00000463711 170 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 RPS29P20-201ENST00000489592 171 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.43□□□□□ -1.86
SNRPA1P09661 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.43□□□□□ -1.86
SNRPA1P09661 RNA5SP148-201ENST00000516527 94 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 LINC00933-203ENST00000559812 219 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.43□□□□□ -1.86
SNRPA1P09661 MIR3671-201ENST00000580455 88 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 AC020895.1-201ENST00000595362 272 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 AC004832.5-201ENST00000608677 401 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.43□□□□□ -1.86
SNRPA1P09661 AC097372.5-201ENST00000623665 376 ntBASIC3.43□□□□□ -1.86
SNRPA1P09661 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.43□□□□□ -1.86
SNRPA1P09661 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SNRPA1P09661 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNRPA1P09661 ZNF299P-201ENST00000406845 1804 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 SNORD50.1-201ENST00000362987 71 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 RNU4-42P-201ENST00000364738 142 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 SNORA1.3-201ENST00000384676 136 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 DPH3P2-201ENST00000422618 250 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 MTATP6P7-201ENST00000453315 681 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 U8.20-201ENST00000459445 131 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 RNU7-169P-201ENST00000459456 61 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.42□□□□□ -1.86
SNRPA1P09661 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.42□□□□□ -1.86
SNRPA1P09661 MTCO2P24-201ENST00000515611 426 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.42□□□□□ -1.86
SNRPA1P09661 RNA5SP282-201ENST00000516355 108 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.42□□□□□ -1.86
SNRPA1P09661 MIR3945-201ENST00000581853 98 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 MTND4LP5-201ENST00000605152 292 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 AC099778.2-201ENST00000610904 211 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 MIR4272-201ENST00000635924 64 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 ZNF826P-207ENST00000622273 1910 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 AC008669.1-201ENST00000565823 2178 ntBASIC3.42□□□□□ -1.86
SNRPA1P09661 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNRPA1P09661 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SNRPA1P09661 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.41□□□□□ -1.86
SNRPA1P09661 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNRPA1P09661 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SNRPA1P09661 Y_RNA.47-201ENST00000362697 108 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 RNU6-270P-201ENST00000364131 105 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 SNORA67.4-201ENST00000384688 142 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 RNU6-823P-201ENST00000391042 103 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 SAR1AP2-201ENST00000392696 594 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 RPS4XP3-201ENST00000398541 413 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 RNU6-101P-201ENST00000410323 104 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 EIF4EP2-201ENST00000422816 654 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 AC092423.1-201ENST00000430165 186 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 EEF1B2P7-201ENST00000451177 676 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 OR2AQ1P-201ENST00000451972 200 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.41□□□□□ -1.86
SNRPA1P09661 AC112492.4-201ENST00000456549 352 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 RPS27P29-201ENST00000463110 252 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.41□□□□□ -1.86
SNRPA1P09661 AC114801.2-201ENST00000503825 781 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 RNU6-475P-201ENST00000516073 104 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 SNORA43.2-201ENST00000516652 128 ntBASIC3.41□□□□□ -1.86
SNRPA1P09661 AP004607.1-201ENST00000524456 203 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 233.9 ms