Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RNU4-26P-201ENST00000410270 107 ntBASIC2.62□□□□□ -1.99
MBD4O95243 RNU2-32P-201ENST00000411193 191 ntBASIC2.62□□□□□ -1.99
MBD4O95243 RN7SKP192-201ENST00000411291 327 ntBASIC2.62□□□□□ -1.99
MBD4O95243 EDDM3CP-201ENST00000415977 425 ntBASIC2.62□□□□□ -1.99
MBD4O95243 SNRPEP10-201ENST00000420249 274 ntBASIC2.62□□□□□ -1.99
MBD4O95243 DPH3P2-201ENST00000422618 250 ntBASIC2.62□□□□□ -1.99
MBD4O95243 RPL23AP95-201ENST00000426806 265 ntBASIC2.62□□□□□ -1.99
MBD4O95243 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.62□□□□□ -1.99
MBD4O95243 AC018868.1-201ENST00000491307 315 ntBASIC2.62□□□□□ -1.99
MBD4O95243 AC016632.1-201ENST00000503994 196 ntBASIC2.62□□□□□ -1.99
MBD4O95243 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.62□□□□□ -1.99
MBD4O95243 AP000889.2-201ENST00000532684 490 ntBASIC2.62□□□□□ -1.99
MBD4O95243 NDUFA5P6-201ENST00000542110 379 ntBASIC2.62□□□□□ -1.99
MBD4O95243 AC025423.5-201ENST00000550230 219 ntBASIC2.62□□□□□ -1.99
MBD4O95243 HSPE1P4-201ENST00000550617 308 ntBASIC2.62□□□□□ -1.99
MBD4O95243 TPRKBP2-201ENST00000565969 475 ntBASIC2.62□□□□□ -1.99
MBD4O95243 AL161423.1-201ENST00000613700 262 ntBASIC2.62□□□□□ -1.99
MBD4O95243 SNORD98-201ENST00000636377 67 ntBASIC2.62□□□□□ -1.99
MBD4O95243 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MBD4O95243 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
MBD4O95243 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MBD4O95243 RNU6-451P-201ENST00000362921 107 ntBASIC2.61□□□□□ -1.99
MBD4O95243 Y_RNA.167-201ENST00000363735 109 ntBASIC2.61□□□□□ -1.99
MBD4O95243 RNU6-142P-201ENST00000384019 107 ntBASIC2.61□□□□□ -1.99
MBD4O95243 RNU6-1215P-201ENST00000384441 102 ntBASIC2.61□□□□□ -1.99
MBD4O95243 AL023284.1-201ENST00000403956 276 ntBASIC2.61□□□□□ -1.99
MBD4O95243 RN7SKP32-201ENST00000410167 303 ntBASIC2.61□□□□□ -1.99
MBD4O95243 AP000275.1-201ENST00000411943 390 ntBASIC2.61□□□□□ -1.99
MBD4O95243 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.61□□□□□ -1.99
MBD4O95243 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.61□□□□□ -1.99
MBD4O95243 SNORA4.4-201ENST00000515921 135 ntBASIC2.61□□□□□ -1.99
MBD4O95243 RNA5SP137-201ENST00000516833 135 ntBASIC2.61□□□□□ -1.99
MBD4O95243 AC022616.8-201ENST00000533569 253 ntBASIC2.61□□□□□ -1.99
MBD4O95243 AC026271.5-201ENST00000577873 130 ntBASIC2.61□□□□□ -1.99
MBD4O95243 BNIP3P25-201ENST00000596023 559 ntBASIC2.61□□□□□ -1.99
MBD4O95243 AC139792.2-201ENST00000624218 587 ntBASIC2.61□□□□□ -1.99
MBD4O95243 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.6□□□□□ -1.99
MBD4O95243 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
MBD4O95243 Y_RNA.38-201ENST00000362617 102 ntBASIC2.6□□□□□ -1.99
MBD4O95243 RNY4P14-201ENST00000363656 96 ntBASIC2.6□□□□□ -1.99
MBD4O95243 RNU6-1090P-201ENST00000364065 94 ntBASIC2.6□□□□□ -1.99
MBD4O95243 RNU6-1329P-201ENST00000365664 107 ntBASIC2.6□□□□□ -1.99
MBD4O95243 RNU6-214P-201ENST00000384130 107 ntBASIC2.6□□□□□ -1.99
MBD4O95243 SNORA67.3-201ENST00000384366 140 ntBASIC2.6□□□□□ -1.99
MBD4O95243 Y_RNA.516-201ENST00000384541 124 ntBASIC2.6□□□□□ -1.99
MBD4O95243 SNORA11.4-201ENST00000408823 129 ntBASIC2.6□□□□□ -1.99
MBD4O95243 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.6□□□□□ -1.99
MBD4O95243 AL590135.1-201ENST00000422215 156 ntBASIC2.6□□□□□ -1.99
MBD4O95243 AC019205.3-201ENST00000424573 156 ntBASIC2.6□□□□□ -1.99
MBD4O95243 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.6□□□□□ -1.99
MBD4O95243 SRIP2-201ENST00000428470 166 ntBASIC2.6□□□□□ -1.99
MBD4O95243 CBX3P6-201ENST00000430257 527 ntBASIC2.6□□□□□ -1.99
MBD4O95243 AL133396.1-201ENST00000432048 687 ntBASIC2.6□□□□□ -1.99
MBD4O95243 AC016700.2-201ENST00000446011 156 ntBASIC2.6□□□□□ -1.99
MBD4O95243 AL031659.1-201ENST00000447075 539 ntBASIC2.6□□□□□ -1.99
MBD4O95243 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.6□□□□□ -1.99
MBD4O95243 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.6□□□□□ -1.99
MBD4O95243 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.6□□□□□ -1.99
MBD4O95243 AC015911.1-201ENST00000495111 156 ntBASIC2.6□□□□□ -1.99
MBD4O95243 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.6□□□□□ -1.99
MBD4O95243 RNA5SP200-201ENST00000516360 103 ntBASIC2.6□□□□□ -1.99
MBD4O95243 SCARNA16.3-201ENST00000516595 184 ntBASIC2.6□□□□□ -1.99
MBD4O95243 RNU6-667P-201ENST00000517186 102 ntBASIC2.6□□□□□ -1.99
MBD4O95243 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.6□□□□□ -1.99
MBD4O95243 MTND1P5-201ENST00000517906 940 ntBASIC2.6□□□□□ -1.99
MBD4O95243 MIR4648-201ENST00000580107 72 ntBASIC2.6□□□□□ -1.99
MBD4O95243 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.6□□□□□ -1.99
MBD4O95243 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.6□□□□□ -1.99
MBD4O95243 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.6□□□□□ -1.99
MBD4O95243 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.6□□□□□ -1.99
MBD4O95243 MIR203B-201ENST00000636080 86 ntBASIC2.6□□□□□ -1.99
MBD4O95243 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
MBD4O95243 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
MBD4O95243 RNU6-944P-201ENST00000364023 107 ntBASIC2.59□□□□□ -1.99
MBD4O95243 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
MBD4O95243 SNORA26.3-201ENST00000391119 136 ntBASIC2.59□□□□□ -1.99
MBD4O95243 MIR1261-201ENST00000408659 82 ntBASIC2.59□□□□□ -1.99
MBD4O95243 MTCO1P21-201ENST00000416634 589 ntBASIC2.59□□□□□ -1.99
MBD4O95243 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.59□□□□□ -1.99
MBD4O95243 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.59□□□□□ -1.99
MBD4O95243 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.59□□□□□ -1.99
MBD4O95243 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.59□□□□□ -1.99
MBD4O95243 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.59□□□□□ -1.99
MBD4O95243 U8.21-201ENST00000459536 136 ntBASIC2.59□□□□□ -1.99
MBD4O95243 AC107222.1-201ENST00000510899 637 ntBASIC2.59□□□□□ -1.99
MBD4O95243 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.59□□□□□ -1.99
MBD4O95243 PRELID2P1-201ENST00000552837 301 ntBASIC2.59□□□□□ -1.99
MBD4O95243 AC007375.1-201ENST00000554513 578 ntBASIC2.59□□□□□ -1.99
MBD4O95243 AC116312.1-201ENST00000606841 314 ntBASIC2.59□□□□□ -1.99
MBD4O95243 MIR6132-201ENST00000622083 109 ntBASIC2.59□□□□□ -1.99
MBD4O95243 Y_RNA.256-201ENST00000364594 104 ntBASIC2.58□□□□□ -2
MBD4O95243 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
MBD4O95243 RNU6-611P-201ENST00000384276 104 ntBASIC2.58□□□□□ -2
MBD4O95243 Y_RNA.573-201ENST00000384763 105 ntBASIC2.58□□□□□ -2
MBD4O95243 MIR144-201ENST00000384886 86 ntBASIC2.58□□□□□ -2
MBD4O95243 Y_RNA.597-201ENST00000410463 100 ntBASIC2.58□□□□□ -2
MBD4O95243 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.58□□□□□ -2
MBD4O95243 MRPS10P2-201ENST00000431226 381 ntBASIC2.58□□□□□ -2
MBD4O95243 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.58□□□□□ -2
MBD4O95243 HMGN2P26-201ENST00000463169 339 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 242.1 ms