Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
CACNA1FO60840 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.48□□□□□ -2.01
CACNA1FO60840 RPL23AP88-201ENST00000605759 454 ntBASIC2.48□□□□□ -2.01
CACNA1FO60840 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.48□□□□□ -2.01
CACNA1FO60840 Y_RNA.135-201ENST00000363439 95 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 RNU6-1074P-201ENST00000383995 104 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 SNORA80E-201ENST00000384744 137 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 MIR517A-201ENST00000385001 87 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CACNA1FO60840 SNORA16.2-201ENST00000390991 127 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 RNU6-1156P-201ENST00000410365 100 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 AL445685.2-201ENST00000422551 342 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 HMGN2P30-201ENST00000423237 256 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 IFNA11P-201ENST00000446352 526 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 RNU7-187P-201ENST00000458985 68 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 RPL21P93-201ENST00000480465 489 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.47□□□□□ -2.01
CACNA1FO60840 RNU6-1046P-201ENST00000516538 107 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 RNU6-1256P-201ENST00000516539 103 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 RNU6-1016P-201ENST00000516689 94 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.47□□□□□ -2.01
CACNA1FO60840 RNU6-323P-201ENST00000521915 107 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 PRELID2P1-201ENST00000552837 301 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 AC020895.1-201ENST00000595362 272 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 NUTF2P8-201ENST00000604593 363 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 AC012443.1-201ENST00000605605 231 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 AC083806.3-201ENST00000614016 455 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 AC098657.3-201ENST00000620434 263 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
CACNA1FO60840 AC099654.7-201ENST00000635788 2127 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.47□□□□□ -2.01
CACNA1FO60840 RNA5SP160-201ENST00000364866 120 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 Y_RNA.324-201ENST00000365165 102 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 RNU6-1297P-201ENST00000384415 104 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 RNU6-1106P-201ENST00000390845 107 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.47□□□□□ -2.01
CACNA1FO60840 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.47□□□□□ -2.01
CACNA1FO60840 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.47□□□□□ -2.01
CACNA1FO60840 UBE2D3P2-201ENST00000424409 445 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.47□□□□□ -2.01
CACNA1FO60840 AL603825.1-201ENST00000438481 80 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.47□□□□□ -2.01
CACNA1FO60840 AC087884.1-201ENST00000469738 328 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.47□□□□□ -2.01
CACNA1FO60840 MTCYBP40-201ENST00000509390 1135 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 AC116337.1-201ENST00000509680 687 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 RNU6-123P-201ENST00000516163 102 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CACNA1FO60840 AL162730.1-201ENST00000605734 292 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.47□□□□□ -2.01
CACNA1FO60840 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.01
CACNA1FO60840 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.01
CACNA1FO60840 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.46□□□□□ -2.02
CACNA1FO60840 RNU6-214P-201ENST00000384130 107 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 RNU6-933P-201ENST00000384424 107 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 Y_RNA.496-201ENST00000384444 101 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 RNU6-1197P-201ENST00000391183 107 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 MCFD2P1-201ENST00000417812 300 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 MTND3P2-201ENST00000438452 342 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 ELOCP24-201ENST00000456370 334 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 AC026801.1-201ENST00000497178 464 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 SNORA31.3-201ENST00000516029 96 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 AC069113.1-201ENST00000517763 267 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.46□□□□□ -2.02
CACNA1FO60840 MIR3671-201ENST00000580455 88 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 PISRT1.1-201ENST00000616930 107 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 AC022418.1-201ENST00000624118 445 ntBASIC2.46□□□□□ -2.02
CACNA1FO60840 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.46□□□□□ -2.02
CACNA1FO60840 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CACNA1FO60840 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CACNA1FO60840 Y_RNA.399-201ENST00000383955 105 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 BX682237.1-201ENST00000415016 335 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.45□□□□□ -2.02
CACNA1FO60840 AC090774.1-201ENST00000435925 246 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.45□□□□□ -2.02
CACNA1FO60840 AL359273.1-201ENST00000510918 627 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 RNU6-1315P-201ENST00000517187 99 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.45□□□□□ -2.02
CACNA1FO60840 AC100830.2-201ENST00000581636 240 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 AC002545.1-201ENST00000592511 181 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 AC002044.1-201ENST00000606707 158 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 AL138726.1-201ENST00000614873 333 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 7SK.10-201ENST00000621414 298 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 SDAD1P2-201ENST00000441308 2028 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CACNA1FO60840 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.45□□□□□ -2.02
CACNA1FO60840 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.45□□□□□ -2.02
CACNA1FO60840 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
CACNA1FO60840 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 RNU6-371P-201ENST00000364283 108 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 RNU6-639P-201ENST00000384074 107 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 RNU6-101P-201ENST00000410323 104 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 Y_RNA.646-201ENST00000410980 101 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 AC113618.1-201ENST00000416747 285 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 AC008267.5-201ENST00000424928 265 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.45□□□□□ -2.02
CACNA1FO60840 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.45□□□□□ -2.02
CACNA1FO60840 AL591212.2-201ENST00000433923 257 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.45□□□□□ -2.02
CACNA1FO60840 MTCO3P10-201ENST00000455912 772 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms