Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.51□□□□□ -2.01
LMX1BO60663 AC133134.1-201ENST00000466800 359 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.51□□□□□ -2.01
LMX1BO60663 RPS27AP10-201ENST00000496103 208 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 RNU6-377P-201ENST00000515965 102 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 SNORA43.2-201ENST00000516652 128 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 LINC00933-203ENST00000559812 219 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.51□□□□□ -2.01
LMX1BO60663 MIR4782-201ENST00000577987 79 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 MIR4273-201ENST00000582824 84 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 AC104984.5-201ENST00000586878 94 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 AC024153.1-201ENST00000603103 365 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 HSPE1P7-201ENST00000604681 321 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 AC008962.1-201ENST00000605729 304 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 AC107871.2-201ENST00000612894 502 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 HMGB1P24-202ENST00000615653 685 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
LMX1BO60663 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
LMX1BO60663 AC022336.2-201ENST00000568966 2538 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.51□□□□□ -2.01
LMX1BO60663 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.51□□□□□ -2.01
LMX1BO60663 AC008669.1-201ENST00000565823 2178 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LMX1BO60663 RNU6-874P-201ENST00000362390 105 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 RNU6-105P-201ENST00000363909 104 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 RNU6-450P-201ENST00000364654 107 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 RNU5E-7P-201ENST00000365290 117 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 RNU6-1035P-201ENST00000384477 107 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 RNU6-658P-201ENST00000384606 106 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 MIR521-1-201ENST00000384902 87 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 MIR888-201ENST00000401186 77 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 RPL26P27-201ENST00000414397 437 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 AC096644.2-201ENST00000429278 159 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 MTND3P9-201ENST00000429526 346 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 AL139132.1-201ENST00000431587 344 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.5□□□□□ -2.01
LMX1BO60663 BTF3P15-201ENST00000455606 336 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 AC010655.3-201ENST00000478818 450 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.5□□□□□ -2.01
LMX1BO60663 AK3P2-201ENST00000507976 429 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 RNA5SP385-201ENST00000515947 110 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 RNU1-61P-201ENST00000516107 151 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 RNA5SP76-201ENST00000516277 87 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 RN7SKP282-201ENST00000516824 299 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 SNORD59.2-201ENST00000516873 68 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.5□□□□□ -2.01
LMX1BO60663 AC023442.1-201ENST00000531247 422 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 AC107016.2-201ENST00000547968 190 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 AC008269.2-201ENST00000561915 1105 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 MIR4435-1-201ENST00000582552 80 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 MIR5188-201ENST00000583467 113 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 AC009318.2-201ENST00000610917 651 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 AC004852.3-201ENST00000614131 326 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 MIR6134-201ENST00000617606 109 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.5□□□□□ -2.01
LMX1BO60663 MIR6733-201ENST00000635723 61 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 IGHVIII-44-202ENST00000636235 289 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LMX1BO60663 ZNF72P-201ENST00000425869 1908 ntBASIC2.5□□□□□ -2.01
LMX1BO60663 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.5□□□□□ -2.01
LMX1BO60663 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.5□□□□□ -2.01
LMX1BO60663 ZNF299P-201ENST00000406845 1804 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 MTND5P9-201ENST00000503854 1755 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.49□□□□□ -2.01
LMX1BO60663 Y_RNA.47-201ENST00000362697 108 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 Y_RNA.193-201ENST00000363979 102 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.49□□□□□ -2.01
LMX1BO60663 RNU6-196P-201ENST00000384315 107 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 RNU6-784P-201ENST00000384330 106 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 RNU6-933P-201ENST00000384424 107 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 RNU6-851P-201ENST00000384565 107 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LMX1BO60663 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.49□□□□□ -2.01
LMX1BO60663 AC114482.1-201ENST00000418010 247 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 AC099548.1-201ENST00000421443 426 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LMX1BO60663 AC105272.1-201ENST00000438604 198 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.49□□□□□ -2.01
LMX1BO60663 AL135938.1-201ENST00000443141 297 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.49□□□□□ -2.01
LMX1BO60663 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.49□□□□□ -2.01
LMX1BO60663 RPS29P26-201ENST00000477483 171 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.49□□□□□ -2.01
LMX1BO60663 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.49□□□□□ -2.01
LMX1BO60663 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.49□□□□□ -2.01
LMX1BO60663 AL355598.1-201ENST00000604169 202 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 AC010205.1-201ENST00000616668 449 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LMX1BO60663 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LMX1BO60663 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LMX1BO60663 AC092435.3-201ENST00000565538 3654 ntBASIC2.49□□□□□ -2.01
LMX1BO60663 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.49□□□□□ -2.01
LMX1BO60663 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.48□□□□□ -2.01
LMX1BO60663 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
LMX1BO60663 Y_RNA.314-201ENST00000365114 102 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 RNU1-100P-201ENST00000365255 165 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 SET-203ENST00000372688 801 ntTSL 2 BASIC2.48□□□□□ -2.01
LMX1BO60663 MIR512-1-201ENST00000384913 84 ntBASIC2.48□□□□□ -2.01
LMX1BO60663 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms