Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC008163.1-202ENST00000636004 2889 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 Y_RNA.22-201ENST00000362492 102 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 RNU6-105P-201ENST00000363909 104 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 RNU6-641P-201ENST00000384006 107 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 RNU6-1200P-201ENST00000384162 107 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 SNORA25-201ENST00000384384 134 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 MIR515-2-201ENST00000384883 83 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 MIR515-1-201ENST00000384884 83 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 MIR548B-201ENST00000385247 97 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 MIR100-201ENST00000385259 80 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
VCX3BQ9H321 RNU2-3P-201ENST00000410144 191 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 RPL21P111-201ENST00000418453 477 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 SNRPEP10-201ENST00000420249 274 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 AC123900.1-201ENST00000420390 96 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
VCX3BQ9H321 AL591043.1-201ENST00000432461 424 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.82□□□□□ -2.28
VCX3BQ9H321 AC132479.1-201ENST00000449160 144 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 AL049829.1-201ENST00000465411 156 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 AC103851.1-201ENST00000506833 274 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 AC117522.1-201ENST00000509821 380 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 SNORA3.4-201ENST00000515969 96 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.82□□□□□ -2.28
VCX3BQ9H321 AP003181.2-201ENST00000528941 181 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 MIR5692A1-201ENST00000580523 69 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 AL031281.1-201ENST00000604049 488 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 AL359999.1-201ENST00000604513 294 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 AL031775.1-201ENST00000607014 887 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 AL359740.1-201ENST00000624340 592 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 AC019226.2-201ENST00000625973 424 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.82□□□□□ -2.28
VCX3BQ9H321 U4.7-201ENST00000638126 106 ntBASIC0.82□□□□□ -2.28
VCX3BQ9H321 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
VCX3BQ9H321 RNU5F-6P-201ENST00000362979 116 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 RNU6-1176P-201ENST00000390955 107 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 RNA5SP111-201ENST00000411386 101 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 AC006461.1-201ENST00000412637 326 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 C1DP2-201ENST00000418167 426 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 MTCYBP39-201ENST00000437562 491 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 RPS27AP8-201ENST00000452665 445 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.81□□□□□ -2.28
VCX3BQ9H321 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.81□□□□□ -2.28
VCX3BQ9H321 UBE2V1P12-201ENST00000503954 474 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 AC022447.4-201ENST00000504053 364 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 AC104806.1-201ENST00000508720 308 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 MTND3P25-201ENST00000509243 135 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 AC116337.1-201ENST00000509680 687 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 ATP5EP1-201ENST00000510257 156 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.81□□□□□ -2.28
VCX3BQ9H321 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.81□□□□□ -2.28
VCX3BQ9H321 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 RNU5A-4P-201ENST00000516588 111 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 RNU6-685P-201ENST00000517088 95 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 RNA5SP437-201ENST00000517249 129 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.81□□□□□ -2.28
VCX3BQ9H321 MTND4P33-201ENST00000556706 766 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.81□□□□□ -2.28
VCX3BQ9H321 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.81□□□□□ -2.28
VCX3BQ9H321 AP000811.1-201ENST00000603803 651 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 AC105129.3-201ENST00000605455 485 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
VCX3BQ9H321 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 Z69720.2-201ENST00000624755 279 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 AP000720.1-201ENST00000625091 483 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 AC095038.3-201ENST00000634439 195 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 SNORD98-201ENST00000636377 67 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 AL445984.1-201ENST00000637834 659 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 MTND4P9-201ENST00000507819 1346 ntBASIC0.81□□□□□ -2.28
VCX3BQ9H321 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.8□□□□□ -2.28
VCX3BQ9H321 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
VCX3BQ9H321 RNU6-527P-201ENST00000363425 104 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 Y_RNA.255-201ENST00000364581 97 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
VCX3BQ9H321 Y_RNA.500-201ENST00000384466 111 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 RPL23AP32-201ENST00000395315 459 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.8□□□□□ -2.28
VCX3BQ9H321 Y_RNA.608-201ENST00000410647 95 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 RNU6-607P-201ENST00000411283 108 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 CYCSP33-201ENST00000414485 327 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.8□□□□□ -2.28
VCX3BQ9H321 ELOCP4-201ENST00000420090 333 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.8□□□□□ -2.28
VCX3BQ9H321 AL009048.1-201ENST00000450437 298 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.8□□□□□ -2.28
VCX3BQ9H321 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
VCX3BQ9H321 MTND3P5-201ENST00000512798 333 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 SUMO2P18-201ENST00000518873 252 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.8□□□□□ -2.28
VCX3BQ9H321 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.8□□□□□ -2.28
VCX3BQ9H321 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.8□□□□□ -2.28
VCX3BQ9H321 AC090888.2-201ENST00000559765 1144 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 AC008752.3-201ENST00000588113 712 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 AC110760.3-201ENST00000598794 467 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 AC069114.2-201ENST00000604699 304 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 RNU6-87P-201ENST00000607561 108 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 AC013412.1-201ENST00000610687 192 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms