Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RPL23AP95-201ENST00000426806 265 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 MTND3P9-201ENST00000429526 346 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 GPM6BP3-201ENST00000442797 145 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 RN7SL499P-201ENST00000481141 276 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 AC104564.1-201ENST00000493028 407 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 AC096745.1-201ENST00000509945 370 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 AC008549.1-201ENST00000512900 643 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 RNU6-256P-201ENST00000516747 97 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 AC118273.2-201ENST00000532092 465 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 CYCSP26-201ENST00000534107 320 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 RPL12P50-201ENST00000603116 116 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 AL353621.2-201ENST00000605340 133 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 AC104237.2-201ENST00000612456 443 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 AC009033.1-201ENST00000624279 431 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 AC099654.10-201ENST00000640395 161 ntBASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.82□□□□□ -1.96
HERPUD2Q9BSE4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 RNU5E-4P-201ENST00000364931 120 ntBASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 AL356057.3-201ENST00000402607 340 ntBASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 Y_RNA.597-201ENST00000410463 100 ntBASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 RNU6-325P-201ENST00000411132 105 ntBASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 RNU2-32P-201ENST00000411193 191 ntBASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 AL030996.1-201ENST00000411430 235 ntBASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 AC105272.1-201ENST00000438604 198 ntBASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 RPS29P25-201ENST00000481709 171 ntBASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 AL033523.1-201ENST00000605153 153 ntBASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 AL359314.1-201ENST00000616913 261 ntBASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 AC131280.1-202ENST00000624067 4211 ntBASIC2.81□□□□□ -1.96
HERPUD2Q9BSE4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 MAPK10-266ENST00000641066 6555 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 RNA5SP393-201ENST00000363423 117 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 SNORA5B-201ENST00000363786 132 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 SNORA32.2-201ENST00000384049 122 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 RNU1-148P-201ENST00000384472 162 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 MIR524-201ENST00000385242 87 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 AL138827.1-201ENST00000402666 306 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 MTCO3P18-201ENST00000440206 761 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 AC116353.2-201ENST00000505332 712 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 RNU6-567P-201ENST00000516746 107 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 RNU6-1314P-201ENST00000517139 104 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 AC021231.3-201ENST00000558497 370 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 SNORA59B-202ENST00000578183 701 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 MIR3923-201ENST00000579521 83 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 AL356055.1-201ENST00000602528 446 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 SNORD14A-201ENST00000606526 91 ntBASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.8□□□□□ -1.96
HERPUD2Q9BSE4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 AC007336.1-201ENST00000576365 3828 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 Y_RNA.248-201ENST00000364501 109 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 RNU6-1013P-201ENST00000384180 107 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 Y_RNA.510-201ENST00000384511 114 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 MIR521-1-201ENST00000384902 87 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 AL513185.2-201ENST00000425543 193 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 AC087499.2-201ENST00000432861 149 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 AL645568.3-201ENST00000433683 316 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 MTATP6P13-201ENST00000438531 667 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 NFU1P2-201ENST00000448700 469 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 RNU7-66P-201ENST00000459469 62 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 AP000852.1-201ENST00000472460 573 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 AC145146.1-201ENST00000496370 254 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 AC091874.1-201ENST00000511402 339 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 SNORA4.4-201ENST00000515921 135 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 SNORA31.16-201ENST00000516773 139 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 ELOCP31-201ENST00000540463 467 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 GTF3AP2-201ENST00000557014 266 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 AC060766.3-201ENST00000591442 263 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.79□□□□□ -1.96
HERPUD2Q9BSE4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.78□□□□□ -1.96
HERPUD2Q9BSE4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
HERPUD2Q9BSE4 RNU6-562P-201ENST00000362731 107 ntBASIC2.78□□□□□ -1.96
HERPUD2Q9BSE4 RNU6-944P-201ENST00000364023 107 ntBASIC2.78□□□□□ -1.96
HERPUD2Q9BSE4 SNORA67.1-201ENST00000364749 141 ntBASIC2.78□□□□□ -1.96
HERPUD2Q9BSE4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms