Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC015911.1-201ENST00000495111 156 ntBASIC3.67□□□□□ -1.82
RTF1Q92541 RPS27AP10-201ENST00000496103 208 ntBASIC3.67□□□□□ -1.82
RTF1Q92541 RNU6-475P-201ENST00000516073 104 ntBASIC3.67□□□□□ -1.82
RTF1Q92541 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.67□□□□□ -1.82
RTF1Q92541 AC010653.1-201ENST00000571108 881 ntBASIC3.67□□□□□ -1.82
RTF1Q92541 RPL12P50-201ENST00000603116 116 ntBASIC3.67□□□□□ -1.82
RTF1Q92541 AC002076.2-201ENST00000617362 122 ntBASIC3.67□□□□□ -1.82
RTF1Q92541 AL078596.1-201ENST00000624856 447 ntBASIC3.67□□□□□ -1.82
RTF1Q92541 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
RTF1Q92541 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.66□□□□□ -1.82
RTF1Q92541 MTND5P9-201ENST00000503854 1755 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 CDC27P3-201ENST00000635418 1910 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 ZNF299P-201ENST00000406845 1804 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 RNU6-227P-201ENST00000362865 103 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 RNU6-942P-201ENST00000363002 107 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 RNU6-105P-201ENST00000363909 104 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RTF1Q92541 RNA5SP184-201ENST00000411071 108 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.66□□□□□ -1.82
RTF1Q92541 NUP35P1-201ENST00000422734 947 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.66□□□□□ -1.82
RTF1Q92541 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.66□□□□□ -1.82
RTF1Q92541 AC124916.1-201ENST00000444020 547 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTF1Q92541 RPL26P9-201ENST00000457466 433 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.66□□□□□ -1.82
RTF1Q92541 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.66□□□□□ -1.82
RTF1Q92541 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.66□□□□□ -1.82
RTF1Q92541 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.66□□□□□ -1.82
RTF1Q92541 AL133393.1-201ENST00000603277 287 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 AC092447.9-201ENST00000603395 144 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 HSPE1P7-201ENST00000604681 321 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 AC090617.7-201ENST00000623952 126 ntBASIC3.66□□□□□ -1.82
RTF1Q92541 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTF1Q92541 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.66□□□□□ -1.82
RTF1Q92541 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTF1Q92541 AC092593.1-201ENST00000515413 1815 ntBASIC3.65□□□□□ -1.82
RTF1Q92541 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.65□□□□□ -1.82
RTF1Q92541 SAR1AP2-201ENST00000392696 594 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 AL138827.1-201ENST00000402666 306 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 MRPS18CP6-201ENST00000423587 223 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 AL358176.2-201ENST00000425769 204 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 AC063976.3-201ENST00000426849 329 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 AL353997.1-201ENST00000432936 108 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 AC091179.1-201ENST00000461606 579 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 RNU6-1046P-201ENST00000516538 107 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 SNORA31.18-201ENST00000517043 134 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 AL391261.3-201ENST00000557194 520 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.65□□□□□ -1.83
RTF1Q92541 AL158827.2-201ENST00000602494 330 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.65□□□□□ -1.83
RTF1Q92541 AC073308.1-201ENST00000623696 305 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 AL691447.3-201ENST00000635020 330 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 AC005592.1-201ENST00000566527 1640 ntBASIC3.65□□□□□ -1.83
RTF1Q92541 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
RTF1Q92541 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.64□□□□□ -1.83
RTF1Q92541 Y_RNA.39-201ENST00000362620 98 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 Y_RNA.48-201ENST00000362710 103 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 Y_RNA.133-201ENST00000363428 110 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 RNU6-99P-201ENST00000364721 107 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 Y_RNA.533-201ENST00000384596 114 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 RNU6-1105P-201ENST00000384774 107 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RTF1Q92541 RNU1-101P-201ENST00000391171 127 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.64□□□□□ -1.83
RTF1Q92541 RNU2-23P-201ENST00000410545 195 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.64□□□□□ -1.83
RTF1Q92541 MTND3P9-201ENST00000429526 346 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.64□□□□□ -1.83
RTF1Q92541 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.64□□□□□ -1.83
RTF1Q92541 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.64□□□□□ -1.83
RTF1Q92541 RPL30P14-201ENST00000482744 348 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.64□□□□□ -1.83
RTF1Q92541 RNU6-764P-201ENST00000516396 105 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 RNU4-77P-201ENST00000516692 156 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 AC090115.4-201ENST00000609970 188 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 AC009318.2-201ENST00000610917 651 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 AL138880.2-201ENST00000616214 239 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 AL138825.1-201ENST00000618587 192 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 AL162373.1-201ENST00000620433 407 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.64□□□□□ -1.83
RTF1Q92541 AL606534.2-204ENST00000635008 178 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.64□□□□□ -1.83
RTF1Q92541 AC110491.1-201ENST00000562191 2010 ntBASIC3.64□□□□□ -1.83
RTF1Q92541 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTF1Q92541 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RTF1Q92541 AC062016.1-201ENST00000355719 319 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 SNORD50.1-201ENST00000362987 71 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 RNU6-595P-201ENST00000363944 107 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 RNU1-112P-201ENST00000364401 164 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 RNU1-100P-201ENST00000365255 165 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 RNU6-784P-201ENST00000384330 106 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 RNU6-1156P-201ENST00000410365 100 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 AP000275.1-201ENST00000411943 390 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 BPY2DP-201ENST00000422208 265 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 MTCYBP10-201ENST00000424905 650 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms