Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 SNORA38.1-201ENST00000364172 131 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 SNORD14B-201ENST00000364533 90 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 Y_RNA.275-201ENST00000364726 110 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 RNU6-326P-201ENST00000365480 107 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 RNU6-514P-201ENST00000384208 107 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 SNORA36C-201ENST00000384289 132 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 Y_RNA.497-201ENST00000384447 98 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 RNU6-21P-201ENST00000384710 107 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 MIR301A-201ENST00000385261 86 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 RNU6-131P-201ENST00000391144 107 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 RNU5E-9P-201ENST00000411164 104 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 Z92545.1-201ENST00000411782 234 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 RPL23AP36-201ENST00000413895 458 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 TOMM20P4-201ENST00000427861 435 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 AC079780.1-201ENST00000428259 207 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 AC009237.7-201ENST00000447357 229 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 Y_RNA.638-201ENST00000459374 113 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 snoU13.3-201ENST00000459441 104 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 RNU5F-8P-201ENST00000515941 111 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 RNU6-479P-201ENST00000516348 105 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 RPL21P9-201ENST00000556149 474 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 MIR4308-201ENST00000580634 81 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 AC002545.1-201ENST00000592511 181 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 Z83843.1-201ENST00000604070 3685 ntBASIC3.53□□□□□ -1.84
TTC9BQ8N6N2 USP8P1-201ENST00000494673 3183 ntBASIC3.53□□□□□ -1.85
TTC9BQ8N6N2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 RNA5SP361-201ENST00000362686 118 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 RNU5A-1-201ENST00000362698 116 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 RNU6-227P-201ENST00000362865 103 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 RNU6-1167P-201ENST00000363227 94 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 RNU6-1289P-201ENST00000384431 106 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 RNU6-843P-201ENST00000384454 104 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 HSPE1P26-201ENST00000405341 275 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 BMS1P22-201ENST00000414726 313 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 RPL21P66-201ENST00000426566 466 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 AL357552.1-201ENST00000445254 415 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 RPL23AP3-201ENST00000453844 468 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 AC091959.1-201ENST00000495857 238 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 RNA5SP272-201ENST00000516095 111 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 RNU6-927P-201ENST00000516199 100 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 RNU6-1073P-201ENST00000517182 106 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 SNORD113-5-201ENST00000607261 78 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 AC099506.2-201ENST00000623074 221 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 OR4G2P-202ENST00000641004 1759 ntBASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TTC9BQ8N6N2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 RNU1-70P-201ENST00000362618 164 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 RNU6-318P-201ENST00000384283 103 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 UBA52P6-201ENST00000399822 382 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 MTCO1P39-201ENST00000426148 480 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 AC024067.1-201ENST00000426199 223 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 MRPS10P1-201ENST00000448483 130 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 HMGN2P7-201ENST00000456186 273 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 snoU13.24-201ENST00000458998 104 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 RPL30P1-201ENST00000488676 339 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 MIR2355-201ENST00000517199 87 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 AC011471.1-201ENST00000585766 187 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 AC010928.2-201ENST00000588017 287 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 AC060766.3-201ENST00000591442 263 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 AP000787.2-201ENST00000604432 568 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 AL161798.1-201ENST00000604630 131 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 MIR4275-201ENST00000636486 87 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 MAPK10-373ENST00000641983 6772 ntBASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.51□□□□□ -1.85
TTC9BQ8N6N2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 MIR412-201ENST00000362142 91 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 SNORD63-201ENST00000384262 68 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 SNORD20-201ENST00000384550 80 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 U3.19-201ENST00000390893 196 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 Y_RNA.623-201ENST00000411128 95 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 VDAC1P3-201ENST00000434069 851 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 snoU109.2-201ENST00000459316 135 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AL049830.2-201ENST00000480072 201 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms