Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU6-251P-201ENST00000363235 104 ntBASIC-0.61□□□□□ -2.51
VPS13CQ709C8 USP9YP19-201ENST00000412165 485 ntBASIC-0.61□□□□□ -2.51
VPS13CQ709C8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.61□□□□□ -2.51
VPS13CQ709C8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-0.61□□□□□ -2.51
VPS13CQ709C8 AC092685.1-201ENST00000447960 1243 ntBASIC-0.61□□□□□ -2.51
VPS13CQ709C8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.61□□□□□ -2.51
VPS13CQ709C8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-0.61□□□□□ -2.51
VPS13CQ709C8 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.61□□□□□ -2.51
VPS13CQ709C8 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC-0.61□□□□□ -2.51
VPS13CQ709C8 AC010615.1-201ENST00000594254 1764 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC-0.62□□□□□ -2.51
VPS13CQ709C8 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.62□□□□□ -2.51
VPS13CQ709C8 AC107304.1-201ENST00000604229 296 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 AC139769.3-201ENST00000618383 175 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 ENSAP3-201ENST00000312710 333 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.62□□□□□ -2.51
VPS13CQ709C8 MTND4P32-201ENST00000437189 1237 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 AC107297.1-201ENST00000459991 176 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.62□□□□□ -2.51
VPS13CQ709C8 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 SNORD14D-201ENST00000384390 87 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 AC006199.1-201ENST00000548728 219 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.62□□□□□ -2.51
VPS13CQ709C8 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.62□□□□□ -2.51
VPS13CQ709C8 AL031176.1-201ENST00000604554 466 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 Z82243.1-201ENST00000609432 473 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 AC004241.3-201ENST00000611728 517 ntBASIC-0.62□□□□□ -2.51
VPS13CQ709C8 RNU6-1035P-201ENST00000384477 107 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AC092809.3-201ENST00000415453 231 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS13CQ709C8 GTF2IP20-201ENST00000431663 360 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS13CQ709C8 RNU6-917P-201ENST00000516294 104 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AL365434.2-201ENST00000607979 234 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AL391099.1-201ENST00000624635 187 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AL136310.1-201ENST00000404926 654 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AL139396.1-201ENST00000421137 167 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.63□□□□□ -2.51
VPS13CQ709C8 RPL30P1-201ENST00000488676 339 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 SNORA31.2-201ENST00000516019 134 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AL355073.2-201ENST00000612106 557 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AC022960.3-201ENST00000619794 441 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.63□□□□□ -2.51
VPS13CQ709C8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.63□□□□□ -2.51
VPS13CQ709C8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.63□□□□□ -2.51
VPS13CQ709C8 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 MIR496-201ENST00000385226 102 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 SNORD83B-201ENST00000386745 93 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 RPS15AP40-201ENST00000419621 391 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 SNORD54-201ENST00000459159 67 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 RNA5SP268-201ENST00000516828 124 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AL356057.1-201ENST00000533798 831 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AC005951.2-201ENST00000576282 495 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AP003465.2-201ENST00000602571 373 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 AP002906.1-201ENST00000603405 233 ntBASIC-0.63□□□□□ -2.51
VPS13CQ709C8 MIR892B-201ENST00000401279 77 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 AL953862.1-201ENST00000423016 168 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.64□□□□□ -2.51
VPS13CQ709C8 BRK1P2-201ENST00000442875 223 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 MTCO2P25-201ENST00000447065 681 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 MTND2P19-201ENST00000449129 1012 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 MTCO3P7-201ENST00000510008 774 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 NACAP3-201ENST00000552100 481 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 MIR4432-201ENST00000581823 84 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 AL662814.1-201ENST00000617364 121 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 MIR597-201ENST00000384968 97 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 MIR196A1-201ENST00000388006 70 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 AF228730.1-201ENST00000397972 663 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 RNU6-233P-201ENST00000410845 141 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.64□□□□□ -2.51
VPS13CQ709C8 RNY4-201ENST00000516507 96 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 MTND2P26-201ENST00000528255 1029 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 MTCYBP27-201ENST00000555160 670 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 AC015688.6-201ENST00000577737 104 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 AC092953.2-201ENST00000608000 699 ntBASIC-0.64□□□□□ -2.51
VPS13CQ709C8 MIR548L-201ENST00000408303 86 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 ZNF886P-201ENST00000450781 723 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 HMGN2P26-201ENST00000463169 339 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 SNORA31.17-201ENST00000516953 127 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.65□□□□□ -2.51
VPS13CQ709C8 AC107954.1-201ENST00000565906 727 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 AC138869.1-201ENST00000568623 124 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 SUGT1P1-201ENST00000379514 476 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.65□□□□□ -2.51
VPS13CQ709C8 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.65□□□□□ -2.51
VPS13CQ709C8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 SNORD116-13-201ENST00000384408 92 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 USP9YP29-201ENST00000445112 563 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 AC023632.1-201ENST00000518463 375 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 MIR5697-201ENST00000578045 78 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 AP000860.1-201ENST00000605250 559 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 CASC19-280ENST00000642102 1351 ntBASIC-0.65□□□□□ -2.51
VPS13CQ709C8 RNU6-925P-201ENST00000384629 104 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.66□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms