Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC171Q6TFL3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC171Q6TFL3 RNA5SP330-201ENST00000517096 96 ntBASIC0.36□□□□□ -2.35
CCDC171Q6TFL3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.36□□□□□ -2.35
CCDC171Q6TFL3 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC171Q6TFL3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.36□□□□□ -2.35
CCDC171Q6TFL3 AC098483.2-201ENST00000603158 454 ntBASIC0.36□□□□□ -2.35
CCDC171Q6TFL3 KATNBL1P5-201ENST00000605015 517 ntBASIC0.36□□□□□ -2.35
CCDC171Q6TFL3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.36□□□□□ -2.35
CCDC171Q6TFL3 AL356094.1-201ENST00000624663 1212 ntBASIC0.36□□□□□ -2.35
CCDC171Q6TFL3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.36□□□□□ -2.35
CCDC171Q6TFL3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 SNORA4.3-201ENST00000365564 137 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 RNU6-1122P-201ENST00000384449 107 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 RNU2-70P-201ENST00000410718 179 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 AC073614.1-201ENST00000438690 650 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 MIR449C-201ENST00000516047 92 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 SNORD60.2-201ENST00000516883 86 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 RNU6-165P-201ENST00000517170 99 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 AC104417.1-201ENST00000523974 751 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 SLC2A13P1-201ENST00000531560 322 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 AC092325.1-201ENST00000566449 554 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 AC060771.1-201ENST00000582031 164 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 HMGN1P30-201ENST00000589286 268 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 AP000676.3-201ENST00000623299 569 ntBASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CCDC171Q6TFL3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.35
CCDC171Q6TFL3 AL391994.1-201ENST00000254724 282 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 RNU4-12P-201ENST00000365233 139 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 RNU6-883P-201ENST00000384597 107 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 RNU6-910P-201ENST00000390844 107 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 RNU6-1176P-201ENST00000390955 107 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 RAP1BP3-201ENST00000407180 549 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 RNA5SP390-201ENST00000410191 113 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 AC123900.1-201ENST00000420390 96 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 AC104563.1-201ENST00000476147 376 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 HMGB1P30-201ENST00000492455 606 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 AK3P2-201ENST00000507976 429 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 RNU6-1102P-201ENST00000516149 96 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 AC025423.5-201ENST00000550230 219 ntBASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.34□□□□□ -2.36
CCDC171Q6TFL3 MIR340-201ENST00000362125 95 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 RNU6-792P-201ENST00000363490 107 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 RNU1-96P-201ENST00000364163 162 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 RNU6-1019P-201ENST00000364424 107 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 RNU6-744P-201ENST00000365557 107 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AC083799.1-201ENST00000366451 910 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 RNU6-1316P-201ENST00000384242 108 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 MIR301A-201ENST00000385261 86 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AL358176.2-201ENST00000425769 204 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 MTND1P30-201ENST00000441241 901 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AL358794.1-201ENST00000445689 381 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 snoU109.2-201ENST00000459316 135 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 RPS26P45-201ENST00000471748 340 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 MTND1P3-201ENST00000484956 952 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 SUMO2P18-201ENST00000518873 252 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AC018659.1-201ENST00000551083 169 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AL442163.3-201ENST00000554110 156 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AC069114.2-201ENST00000604699 304 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AP001596.2-201ENST00000608410 312 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AC007792.1-201ENST00000623023 402 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AC231657.1-201ENST00000624313 397 ntBASIC0.33□□□□□ -2.36
CCDC171Q6TFL3 AL079343.1-201ENST00000572358 1771 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 RNU6-862P-201ENST00000362804 105 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 SNORA63D-201ENST00000364359 132 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 RNA5SP259-201ENST00000365541 109 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 RNU6-701P-201ENST00000384059 107 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 RNU6-1025P-201ENST00000410629 104 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 AC005094.1-201ENST00000440420 368 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 SEPT14P24-201ENST00000447236 180 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 RPL18AP17-201ENST00000455326 198 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 snoU13.27-201ENST00000459278 104 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 AC010468.3-201ENST00000508225 458 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 SNORA31.4-201ENST00000516049 129 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 AL121579.1-201ENST00000555129 305 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 MIR4514-201ENST00000581410 57 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 AC068790.6-201ENST00000602558 258 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 AL391001.1-201ENST00000602747 715 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms