Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.39□□□□□ -1.87
SF3B3Q15393 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.39□□□□□ -1.87
SF3B3Q15393 AC008568.2-201ENST00000623862 2313 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SF3B3Q15393 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SF3B3Q15393 AC091564.4-201ENST00000533934 2194 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.39□□□□□ -1.87
SF3B3Q15393 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SF3B3Q15393 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SF3B3Q15393 MIR148B-201ENST00000362252 99 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 Y_RNA.153-201ENST00000363615 91 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 DYNLT3P1-201ENST00000378574 347 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 Y_RNA.452-201ENST00000384202 108 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 RNA5SP252-201ENST00000391131 119 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.38□□□□□ -1.87
SF3B3Q15393 RNU2-23P-201ENST00000410545 195 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 AL590383.1-201ENST00000428602 75 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 AC009969.1-201ENST00000438726 172 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.38□□□□□ -1.87
SF3B3Q15393 AL513328.1-201ENST00000446460 224 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 RNU6-1037P-201ENST00000459571 107 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 RPS29P12-201ENST00000460178 152 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 RPL17P19-201ENST00000489069 552 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 AC139453.3-201ENST00000493276 369 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 RNU6-475P-201ENST00000516073 104 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 RNU6-56P-201ENST00000516986 93 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 MIR3149-201ENST00000584629 83 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 ZNF861P-201ENST00000588126 639 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 MIR6817-201ENST00000615588 66 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.38□□□□□ -1.87
SF3B3Q15393 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SF3B3Q15393 CDC27P3-201ENST00000635418 1910 ntBASIC3.38□□□□□ -1.87
SF3B3Q15393 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.37□□□□□ -1.87
SF3B3Q15393 MIR26A1-201ENST00000362205 77 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 RNU6-166P-201ENST00000384371 107 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.37□□□□□ -1.87
SF3B3Q15393 PGBD4P6-201ENST00000421501 610 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 AC093151.1-201ENST00000427711 313 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 AC104332.2-201ENST00000429959 156 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 AC009237.8-201ENST00000445492 379 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 AC003982.1-202ENST00000469928 248 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.37□□□□□ -1.87
SF3B3Q15393 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.37□□□□□ -1.87
SF3B3Q15393 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.37□□□□□ -1.87
SF3B3Q15393 AC096725.1-201ENST00000514266 313 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 ACA59.1-201ENST00000515966 143 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 SNORA31.19-201ENST00000517079 126 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 RNA5SP165-201ENST00000517142 115 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 SNORA31.21-201ENST00000517180 77 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 RNA5SP291-201ENST00000517222 105 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 AC245166.1-201ENST00000521012 253 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.37□□□□□ -1.87
SF3B3Q15393 AC004817.2-201ENST00000561794 651 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.37□□□□□ -1.87
SF3B3Q15393 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.37□□□□□ -1.87
SF3B3Q15393 AL645944.1-201ENST00000603857 493 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 AC136601.2-201ENST00000604356 474 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 MIR3976-201ENST00000606807 139 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 SNORD58B-201ENST00000607313 66 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 AC138305.3-201ENST00000624988 240 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 AL606534.2-204ENST00000635008 178 ntBASIC3.37□□□□□ -1.87
SF3B3Q15393 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SF3B3Q15393 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.37□□□□□ -1.87
SF3B3Q15393 AC091812.1-201ENST00000432235 1948 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 AC007785.2-201ENST00000598627 1916 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.36□□□□□ -1.87
SF3B3Q15393 Y_RNA.47-201ENST00000362697 108 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 Y_RNA.149-201ENST00000363558 117 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 Y_RNA.193-201ENST00000363979 102 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 RNU6-1317P-201ENST00000364582 104 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 U8.8-201ENST00000365399 135 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 Y_RNA.485-201ENST00000384395 102 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 MIR493-201ENST00000385254 89 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 AL513475.1-201ENST00000406602 315 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 AC096644.2-201ENST00000429278 159 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 Z82210.1-201ENST00000440037 231 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 AC112492.4-201ENST00000456549 352 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 RPL23AP45-201ENST00000476406 468 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 CBX3P8-201ENST00000532412 525 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 HMGB1P14-201ENST00000557424 591 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.36□□□□□ -1.87
SF3B3Q15393 AC006006.1-201ENST00000603082 144 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 AC018889.1-201ENST00000605372 397 ntBASIC3.36□□□□□ -1.87
SF3B3Q15393 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SF3B3Q15393 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SF3B3Q15393 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SF3B3Q15393 RPL9P7-201ENST00000330965 580 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 Y_RNA.39-201ENST00000362620 98 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 Y_RNA.48-201ENST00000362710 103 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 RNU6-827P-201ENST00000365553 106 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 RNU6-933P-201ENST00000384424 107 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 Y_RNA.577-201ENST00000384794 101 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 MIR10A-201ENST00000385043 110 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 RPL21P3-201ENST00000395517 478 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.35□□□□□ -1.87
SF3B3Q15393 AL117339.3-201ENST00000418733 162 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.35□□□□□ -1.87
SF3B3Q15393 TMEM167AP1-201ENST00000423409 219 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms