Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNU6-105P-201ENST00000363909 104 ntBASIC3.06□□□□□ -1.92
COPB1P53618 RNU1-100P-201ENST00000365255 165 ntBASIC3.06□□□□□ -1.92
COPB1P53618 RNU1-115P-201ENST00000365329 160 ntBASIC3.06□□□□□ -1.92
COPB1P53618 U8.9-201ENST00000365667 134 ntBASIC3.06□□□□□ -1.92
COPB1P53618 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.06□□□□□ -1.92
COPB1P53618 AL160004.2-201ENST00000432935 350 ntBASIC3.06□□□□□ -1.92
COPB1P53618 SNRPEP4-201ENST00000435815 279 ntBASIC3.06□□□□□ -1.92
COPB1P53618 AL714022.1-201ENST00000439897 151 ntBASIC3.06□□□□□ -1.92
COPB1P53618 HMGN2P10-201ENST00000448085 265 ntBASIC3.06□□□□□ -1.92
COPB1P53618 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.06□□□□□ -1.92
COPB1P53618 SNORD59.2-201ENST00000516873 68 ntBASIC3.06□□□□□ -1.92
COPB1P53618 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.06□□□□□ -1.92
COPB1P53618 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.06□□□□□ -1.92
COPB1P53618 DNAJC8P1-201ENST00000554535 372 ntBASIC3.06□□□□□ -1.92
COPB1P53618 MIR4273-201ENST00000582824 84 ntBASIC3.06□□□□□ -1.92
COPB1P53618 ZNF861P-201ENST00000588126 639 ntBASIC3.06□□□□□ -1.92
COPB1P53618 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COPB1P53618 AC002076.2-201ENST00000617362 122 ntBASIC3.06□□□□□ -1.92
COPB1P53618 AC006111.3-201ENST00000622137 383 ntBASIC3.06□□□□□ -1.92
COPB1P53618 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COPB1P53618 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.05□□□□□ -1.92
COPB1P53618 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
COPB1P53618 MIR26A1-201ENST00000362205 77 ntBASIC3.05□□□□□ -1.92
COPB1P53618 SNORD50.1-201ENST00000362987 71 ntBASIC3.05□□□□□ -1.92
COPB1P53618 Y_RNA.158-201ENST00000363651 101 ntBASIC3.05□□□□□ -1.92
COPB1P53618 SNORA5B-201ENST00000363786 132 ntBASIC3.05□□□□□ -1.92
COPB1P53618 AC117470.1-201ENST00000381974 330 ntBASIC3.05□□□□□ -1.92
COPB1P53618 MIR521-1-201ENST00000384902 87 ntBASIC3.05□□□□□ -1.92
COPB1P53618 AL512633.1-201ENST00000399931 655 ntBASIC3.05□□□□□ -1.92
COPB1P53618 MRPL42P3-201ENST00000401492 326 ntBASIC3.05□□□□□ -1.92
COPB1P53618 AC113618.1-201ENST00000416747 285 ntBASIC3.05□□□□□ -1.92
COPB1P53618 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.05□□□□□ -1.92
COPB1P53618 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.05□□□□□ -1.92
COPB1P53618 EIF4EP2-201ENST00000422816 654 ntBASIC3.05□□□□□ -1.92
COPB1P53618 MRPS18CP6-201ENST00000423587 223 ntBASIC3.05□□□□□ -1.92
COPB1P53618 RPL23AP50-201ENST00000434149 455 ntBASIC3.05□□□□□ -1.92
COPB1P53618 RPL26P9-201ENST00000457466 433 ntBASIC3.05□□□□□ -1.92
COPB1P53618 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.05□□□□□ -1.92
COPB1P53618 RPL17P19-201ENST00000489069 552 ntBASIC3.05□□□□□ -1.92
COPB1P53618 SNORA25.10-201ENST00000515926 124 ntBASIC3.05□□□□□ -1.92
COPB1P53618 Y_RNA.661-201ENST00000516003 99 ntBASIC3.05□□□□□ -1.92
COPB1P53618 RNU6-264P-201ENST00000517134 104 ntBASIC3.05□□□□□ -1.92
COPB1P53618 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.05□□□□□ -1.92
COPB1P53618 NACAP3-201ENST00000552100 481 ntBASIC3.05□□□□□ -1.92
COPB1P53618 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.05□□□□□ -1.92
COPB1P53618 MIR4680-201ENST00000580906 66 ntBASIC3.05□□□□□ -1.92
COPB1P53618 AC020895.1-201ENST00000595362 272 ntBASIC3.05□□□□□ -1.92
COPB1P53618 AC136443.5-201ENST00000603741 370 ntBASIC3.05□□□□□ -1.92
COPB1P53618 AL138880.2-201ENST00000616214 239 ntBASIC3.05□□□□□ -1.92
COPB1P53618 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.05□□□□□ -1.92
COPB1P53618 AC000403.1-201ENST00000613696 3585 ntBASIC3.05□□□□□ -1.92
COPB1P53618 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.05□□□□□ -1.92
COPB1P53618 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
COPB1P53618 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
COPB1P53618 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.04□□□□□ -1.92
COPB1P53618 AC110491.1-201ENST00000562191 2010 ntBASIC3.04□□□□□ -1.92
COPB1P53618 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
COPB1P53618 Y_RNA.428-201ENST00000384078 102 ntBASIC3.04□□□□□ -1.92
COPB1P53618 RNU6-851P-201ENST00000384565 107 ntBASIC3.04□□□□□ -1.92
COPB1P53618 Y_RNA.533-201ENST00000384596 114 ntBASIC3.04□□□□□ -1.92
COPB1P53618 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.04□□□□□ -1.92
COPB1P53618 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.04□□□□□ -1.92
COPB1P53618 AC022018.1-201ENST00000430685 241 ntBASIC3.04□□□□□ -1.92
COPB1P53618 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.04□□□□□ -1.92
COPB1P53618 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.04□□□□□ -1.92
COPB1P53618 AC079354.2-201ENST00000453523 154 ntBASIC3.04□□□□□ -1.92
COPB1P53618 AC010099.1-201ENST00000455434 375 ntBASIC3.04□□□□□ -1.92
COPB1P53618 snoU13.28-201ENST00000459235 104 ntBASIC3.04□□□□□ -1.92
COPB1P53618 RPS26P21-201ENST00000475397 348 ntBASIC3.04□□□□□ -1.92
COPB1P53618 RPL30P14-201ENST00000482744 348 ntBASIC3.04□□□□□ -1.92
COPB1P53618 SNORA31.18-201ENST00000517043 134 ntBASIC3.04□□□□□ -1.92
COPB1P53618 SNORD116.3-201ENST00000517176 78 ntBASIC3.04□□□□□ -1.92
COPB1P53618 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COPB1P53618 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
COPB1P53618 AC021739.1-201ENST00000559631 174 ntBASIC3.04□□□□□ -1.92
COPB1P53618 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.04□□□□□ -1.92
COPB1P53618 AC010653.1-201ENST00000571108 881 ntBASIC3.04□□□□□ -1.92
COPB1P53618 MIR5701-3-201ENST00000578890 82 ntBASIC3.04□□□□□ -1.92
COPB1P53618 MIR5701-1-201ENST00000585138 82 ntBASIC3.04□□□□□ -1.92
COPB1P53618 AC008737.2-201ENST00000599446 118 ntBASIC3.04□□□□□ -1.92
COPB1P53618 AP001836.1-201ENST00000604675 523 ntBASIC3.04□□□□□ -1.92
COPB1P53618 AC006157.1-201ENST00000611750 366 ntBASIC3.04□□□□□ -1.92
COPB1P53618 MIR5701-2-201ENST00000615634 82 ntBASIC3.04□□□□□ -1.92
COPB1P53618 AC068831.7-201ENST00000616954 363 ntBASIC3.04□□□□□ -1.92
COPB1P53618 AC073308.1-201ENST00000623696 305 ntBASIC3.04□□□□□ -1.92
COPB1P53618 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.04□□□□□ -1.92
COPB1P53618 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.04□□□□□ -1.92
COPB1P53618 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.04□□□□□ -1.92
COPB1P53618 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COPB1P53618 AC004944.1-201ENST00000517807 3059 ntBASIC3.04□□□□□ -1.92
COPB1P53618 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
COPB1P53618 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COPB1P53618 AC010680.1-201ENST00000590024 3590 ntBASIC3.03□□□□□ -1.92
COPB1P53618 RNU6-227P-201ENST00000362865 103 ntBASIC3.03□□□□□ -1.92
COPB1P53618 RNY1P16-201ENST00000363063 111 ntBASIC3.03□□□□□ -1.92
COPB1P53618 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.03□□□□□ -1.92
COPB1P53618 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.03□□□□□ -1.92
COPB1P53618 NUP35P1-201ENST00000422734 947 ntBASIC3.03□□□□□ -1.92
COPB1P53618 MTND3P9-201ENST00000429526 346 ntBASIC3.03□□□□□ -1.92
COPB1P53618 AL353997.1-201ENST00000432936 108 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms