Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC004486.1-201ENST00000546846 233 ntBASIC2.39□□□□□ -2.03
PDX1P52945 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.39□□□□□ -2.03
PDX1P52945 AC026464.5-201ENST00000562497 722 ntBASIC2.39□□□□□ -2.03
PDX1P52945 AC103810.1-201ENST00000579873 453 ntBASIC2.39□□□□□ -2.03
PDX1P52945 AC093913.1-201ENST00000614178 329 ntBASIC2.39□□□□□ -2.03
PDX1P52945 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDX1P52945 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PDX1P52945 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PDX1P52945 AC026241.1-201ENST00000517873 2142 ntBASIC2.39□□□□□ -2.03
PDX1P52945 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDX1P52945 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.38□□□□□ -2.03
PDX1P52945 MTND4P23-201ENST00000447723 1363 ntBASIC2.38□□□□□ -2.03
PDX1P52945 CBX3P1-201ENST00000325243 554 ntBASIC2.38□□□□□ -2.03
PDX1P52945 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PDX1P52945 RNU6-128P-201ENST00000383976 107 ntBASIC2.38□□□□□ -2.03
PDX1P52945 RNU6-214P-201ENST00000384130 107 ntBASIC2.38□□□□□ -2.03
PDX1P52945 RNU6-95P-201ENST00000384697 107 ntBASIC2.38□□□□□ -2.03
PDX1P52945 MIR627-201ENST00000384979 97 ntBASIC2.38□□□□□ -2.03
PDX1P52945 MIR504-201ENST00000385065 83 ntBASIC2.38□□□□□ -2.03
PDX1P52945 AC138393.2-201ENST00000414742 246 ntBASIC2.38□□□□□ -2.03
PDX1P52945 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.38□□□□□ -2.03
PDX1P52945 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.38□□□□□ -2.03
PDX1P52945 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.38□□□□□ -2.03
PDX1P52945 IFNA20P-201ENST00000436840 528 ntBASIC2.38□□□□□ -2.03
PDX1P52945 MTCO2P3-201ENST00000442543 421 ntBASIC2.38□□□□□ -2.03
PDX1P52945 AP000705.1-201ENST00000454567 350 ntBASIC2.38□□□□□ -2.03
PDX1P52945 RNU6-329P-201ENST00000459618 107 ntBASIC2.38□□□□□ -2.03
PDX1P52945 RN7SL636P-201ENST00000497504 294 ntBASIC2.38□□□□□ -2.03
PDX1P52945 RNU6-826P-201ENST00000516827 104 ntBASIC2.38□□□□□ -2.03
PDX1P52945 SNORA31.18-201ENST00000517043 134 ntBASIC2.38□□□□□ -2.03
PDX1P52945 IGKV3-31-201ENST00000523109 329 ntBASIC2.38□□□□□ -2.03
PDX1P52945 AP005639.2-201ENST00000527592 928 ntBASIC2.38□□□□□ -2.03
PDX1P52945 AC026371.1-201ENST00000551867 419 ntBASIC2.38□□□□□ -2.03
PDX1P52945 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.38□□□□□ -2.03
PDX1P52945 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.38□□□□□ -2.03
PDX1P52945 AC100830.2-201ENST00000581636 240 ntBASIC2.38□□□□□ -2.03
PDX1P52945 AC011712.1-201ENST00000588959 234 ntBASIC2.38□□□□□ -2.03
PDX1P52945 BNIP3P16-201ENST00000589779 534 ntBASIC2.38□□□□□ -2.03
PDX1P52945 AC104237.2-201ENST00000612456 443 ntBASIC2.38□□□□□ -2.03
PDX1P52945 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.38□□□□□ -2.03
PDX1P52945 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
PDX1P52945 AC010329.5-201ENST00000623497 2174 ntBASIC2.37□□□□□ -2.03
PDX1P52945 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.37□□□□□ -2.03
PDX1P52945 MTND5P30-201ENST00000452896 1731 ntBASIC2.37□□□□□ -2.03
PDX1P52945 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.37□□□□□ -2.03
PDX1P52945 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PDX1P52945 RNU6-1010P-201ENST00000362757 107 ntBASIC2.37□□□□□ -2.03
PDX1P52945 RNU6-486P-201ENST00000363116 107 ntBASIC2.37□□□□□ -2.03
PDX1P52945 VTRNA1-1-201ENST00000363120 99 ntBASIC2.37□□□□□ -2.03
PDX1P52945 Y_RNA.184-201ENST00000363884 108 ntBASIC2.37□□□□□ -2.03
PDX1P52945 SNORD56.5-201ENST00000364281 72 ntBASIC2.37□□□□□ -2.03
PDX1P52945 RNU6-1317P-201ENST00000364582 104 ntBASIC2.37□□□□□ -2.03
PDX1P52945 Y_RNA.301-201ENST00000364990 103 ntBASIC2.37□□□□□ -2.03
PDX1P52945 MIR544A-201ENST00000384855 91 ntBASIC2.37□□□□□ -2.03
PDX1P52945 RNU6-220P-201ENST00000390919 107 ntBASIC2.37□□□□□ -2.03
PDX1P52945 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PDX1P52945 RNA5SP425-201ENST00000410336 112 ntBASIC2.37□□□□□ -2.03
PDX1P52945 RNU6-325P-201ENST00000411132 105 ntBASIC2.37□□□□□ -2.03
PDX1P52945 AC138623.1-201ENST00000418060 216 ntBASIC2.37□□□□□ -2.03
PDX1P52945 PDCL2P1-201ENST00000419302 352 ntBASIC2.37□□□□□ -2.03
PDX1P52945 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.37□□□□□ -2.03
PDX1P52945 AC097463.2-201ENST00000421074 142 ntBASIC2.37□□□□□ -2.03
PDX1P52945 BX276092.3-201ENST00000424182 230 ntBASIC2.37□□□□□ -2.03
PDX1P52945 AC008267.5-201ENST00000424928 265 ntBASIC2.37□□□□□ -2.03
PDX1P52945 UBE2V1P4-201ENST00000425374 344 ntBASIC2.37□□□□□ -2.03
PDX1P52945 MICF-203ENST00000432679 129 ntBASIC2.37□□□□□ -2.03
PDX1P52945 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.37□□□□□ -2.03
PDX1P52945 MTND1P11-201ENST00000456661 876 ntBASIC2.37□□□□□ -2.03
PDX1P52945 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.37□□□□□ -2.03
PDX1P52945 PMCHL2-203ENST00000457791 237 ntBASIC2.37□□□□□ -2.03
PDX1P52945 AC008571.1-201ENST00000467232 300 ntBASIC2.37□□□□□ -2.03
PDX1P52945 AC018437.1-201ENST00000492214 406 ntBASIC2.37□□□□□ -2.03
PDX1P52945 RNA5SP112-201ENST00000515937 99 ntBASIC2.37□□□□□ -2.03
PDX1P52945 SCARNA3-201ENST00000517097 143 ntBASIC2.37□□□□□ -2.03
PDX1P52945 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.37□□□□□ -2.03
PDX1P52945 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.37□□□□□ -2.03
PDX1P52945 AC007336.1-201ENST00000576365 3828 ntBASIC2.37□□□□□ -2.03
PDX1P52945 MIR3670-2-201ENST00000582974 65 ntBASIC2.37□□□□□ -2.03
PDX1P52945 MIR5092-201ENST00000583139 88 ntBASIC2.37□□□□□ -2.03
PDX1P52945 MIR3670-1-201ENST00000584160 65 ntBASIC2.37□□□□□ -2.03
PDX1P52945 MIR3670-3-201ENST00000584855 65 ntBASIC2.37□□□□□ -2.03
PDX1P52945 AC103810.6-201ENST00000606708 136 ntBASIC2.37□□□□□ -2.03
PDX1P52945 MIR3670-4-201ENST00000612260 65 ntBASIC2.37□□□□□ -2.03
PDX1P52945 AC244517.12-201ENST00000623581 663 ntBASIC2.37□□□□□ -2.03
PDX1P52945 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PDX1P52945 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PDX1P52945 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
PDX1P52945 RNU6-562P-201ENST00000362731 107 ntBASIC2.36□□□□□ -2.03
PDX1P52945 RNU6-529P-201ENST00000363383 104 ntBASIC2.36□□□□□ -2.03
PDX1P52945 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PDX1P52945 SNORD116-11-201ENST00000383882 92 ntBASIC2.36□□□□□ -2.03
PDX1P52945 RNY3P14-201ENST00000384309 102 ntBASIC2.36□□□□□ -2.03
PDX1P52945 MIR186-201ENST00000384988 86 ntBASIC2.36□□□□□ -2.03
PDX1P52945 RNU2-23P-201ENST00000410545 195 ntBASIC2.36□□□□□ -2.03
PDX1P52945 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.36□□□□□ -2.03
PDX1P52945 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PDX1P52945 AC092427.1-202ENST00000430569 476 ntBASIC2.36□□□□□ -2.03
PDX1P52945 RPS15AP10-201ENST00000432472 382 ntBASIC2.36□□□□□ -2.03
PDX1P52945 USP9YP8-201ENST00000441913 500 ntBASIC2.36□□□□□ -2.03
PDX1P52945 AL031659.1-201ENST00000447075 539 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms