Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
CHRNA4P43681 U8.1-201ENST00000362843 134 ntBASIC4.15□□□□□ -1.75
CHRNA4P43681 Y_RNA.120-201ENST00000363304 110 ntBASIC4.15□□□□□ -1.75
CHRNA4P43681 MIR514A1-201ENST00000385133 98 ntBASIC4.15□□□□□ -1.75
CHRNA4P43681 MIRLET7F2-201ENST00000385277 83 ntBASIC4.15□□□□□ -1.75
CHRNA4P43681 AL512633.1-201ENST00000399931 655 ntBASIC4.15□□□□□ -1.75
CHRNA4P43681 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA4P43681 Y_RNA.649-201ENST00000459077 103 ntBASIC4.15□□□□□ -1.75
CHRNA4P43681 AL049874.1-201ENST00000489560 388 ntBASIC4.15□□□□□ -1.75
CHRNA4P43681 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.15□□□□□ -1.75
CHRNA4P43681 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA4P43681 AL161713.1-201ENST00000555538 145 ntBASIC4.15□□□□□ -1.75
CHRNA4P43681 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA4P43681 AC120024.3-201ENST00000603167 156 ntBASIC4.15□□□□□ -1.75
CHRNA4P43681 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA4P43681 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.15□□□□□ -1.75
CHRNA4P43681 MIR8059-201ENST00000620427 81 ntBASIC4.15□□□□□ -1.75
CHRNA4P43681 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CHRNA4P43681 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA4P43681 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA4P43681 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA4P43681 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA4P43681 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA4P43681 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA4P43681 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.15□□□□□ -1.75
CHRNA4P43681 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.14□□□□□ -1.75
CHRNA4P43681 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA4P43681 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA4P43681 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CHRNA4P43681 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CHRNA4P43681 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.14□□□□□ -1.75
CHRNA4P43681 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA4P43681 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.14□□□□□ -1.75
CHRNA4P43681 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CHRNA4P43681 AL512604.1-201ENST00000404812 257 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 MIR1193-201ENST00000408109 78 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 RNA5SP475-201ENST00000410568 110 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 AC074117.2-201ENST00000417130 397 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 YPEL5P1-201ENST00000419731 367 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 CYCSP49-201ENST00000420810 319 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 Z82209.1-201ENST00000422141 2135 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 AC098614.2-201ENST00000426040 255 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 HSPE1P21-201ENST00000438283 308 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 AC010618.1-201ENST00000469924 477 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CHRNA4P43681 S100A11P1-201ENST00000477525 312 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 RNU7-143P-201ENST00000516781 65 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.14□□□□□ -1.75
CHRNA4P43681 AC069240.1-201ENST00000548774 375 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.14□□□□□ -1.75
CHRNA4P43681 MIR4458-201ENST00000578872 75 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 AC091178.2-201ENST00000584401 117 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.14□□□□□ -1.75
CHRNA4P43681 AC099669.2-201ENST00000616549 437 ntBASIC4.14□□□□□ -1.75
CHRNA4P43681 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA4P43681 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.14□□□□□ -1.75
CHRNA4P43681 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA4P43681 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.14□□□□□ -1.75
CHRNA4P43681 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA4P43681 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.14□□□□□ -1.75
CHRNA4P43681 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA4P43681 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CHRNA4P43681 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA4P43681 AL136164.4-201ENST00000625013 2135 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CHRNA4P43681 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA4P43681 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA4P43681 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CHRNA4P43681 RNA5SP513-201ENST00000364648 118 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 Y_RNA.328-201ENST00000365208 113 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 Y_RNA.346-201ENST00000365385 112 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 RNU6-573P-201ENST00000383938 106 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 RNU6-793P-201ENST00000384233 104 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 RNU6-1245P-201ENST00000411130 106 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 RPS26P42-201ENST00000413485 326 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 Z85995.1-201ENST00000415547 335 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 EDDM3CP-201ENST00000415977 425 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 FTH1P6-201ENST00000430768 320 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 AC245047.4-201ENST00000433189 144 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 AC004386.2-201ENST00000441858 148 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 AC109327.2-201ENST00000448339 378 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 AC006026.2-201ENST00000457376 180 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 RPS26P45-201ENST00000471748 340 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 RN7SL604P-201ENST00000492589 296 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 RNA5SP154-201ENST00000516193 111 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 RNU6-412P-201ENST00000516434 106 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 MRPL49P2-201ENST00000521066 465 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.13□□□□□ -1.75
CHRNA4P43681 MIR5684-201ENST00000585074 65 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.13□□□□□ -1.75
CHRNA4P43681 AC024581.2-201ENST00000619986 252 ntBASIC4.13□□□□□ -1.75
CHRNA4P43681 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CHRNA4P43681 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CHRNA4P43681 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
CHRNA4P43681 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA4P43681 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.13□□□□□ -1.75
CHRNA4P43681 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms