Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.43□□□□□ -2.18
BRCA1P38398 AC098657.3-201ENST00000620434 263 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 AC011155.2-201ENST00000623202 216 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 SNORA16B-201ENST00000364674 135 ntBASIC1.42□□□□□ -2.18
BRCA1P38398 RNU2-36P-201ENST00000410361 191 ntBASIC1.42□□□□□ -2.18
BRCA1P38398 Y_RNA.608-201ENST00000410647 95 ntBASIC1.42□□□□□ -2.18
BRCA1P38398 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.42□□□□□ -2.18
BRCA1P38398 GAPDHP17-201ENST00000449858 1001 ntBASIC1.42□□□□□ -2.18
BRCA1P38398 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.42□□□□□ -2.18
BRCA1P38398 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.42□□□□□ -2.18
BRCA1P38398 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.42□□□□□ -2.18
BRCA1P38398 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.42□□□□□ -2.18
BRCA1P38398 AC109446.1-201ENST00000566172 220 ntBASIC1.42□□□□□ -2.18
BRCA1P38398 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.42□□□□□ -2.18
BRCA1P38398 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
BRCA1P38398 RNU4-56P-201ENST00000364700 142 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 SNORD14D-201ENST00000384390 87 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 OR9R1P-201ENST00000412200 877 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.41□□□□□ -2.18
BRCA1P38398 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.41□□□□□ -2.18
BRCA1P38398 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.41□□□□□ -2.18
BRCA1P38398 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.41□□□□□ -2.18
BRCA1P38398 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.41□□□□□ -2.18
BRCA1P38398 AC243964.1-201ENST00000441814 261 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.41□□□□□ -2.18
BRCA1P38398 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.41□□□□□ -2.18
BRCA1P38398 AC105417.1-201ENST00000514691 285 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 Y_RNA.687-201ENST00000516558 91 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.41□□□□□ -2.18
BRCA1P38398 AC022616.6-201ENST00000520479 119 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 AC018630.3-201ENST00000542637 96 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 AC008521.1-201ENST00000587471 187 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 CLIC4P2-201ENST00000601934 717 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 AP000811.1-201ENST00000603803 651 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 Y_RNA.30-201ENST00000362572 97 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 SNORD114-6-201ENST00000364393 72 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 RNU6-26P-201ENST00000383985 107 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 RAP1BP3-201ENST00000407180 549 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 AL357139.1-201ENST00000407792 426 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
BRCA1P38398 CBX3P6-201ENST00000430257 527 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.41□□□□□ -2.18
BRCA1P38398 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.41□□□□□ -2.18
BRCA1P38398 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.41□□□□□ -2.18
BRCA1P38398 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.41□□□□□ -2.18
BRCA1P38398 AC104806.1-201ENST00000508720 308 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 SNORA44.1-201ENST00000517031 108 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.41□□□□□ -2.18
BRCA1P38398 AC087854.1-201ENST00000519706 414 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 AP001893.2-201ENST00000526949 202 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.41□□□□□ -2.18
BRCA1P38398 AL136363.2-201ENST00000604173 851 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 AL133173.2-201ENST00000614270 90 ntBASIC1.41□□□□□ -2.18
BRCA1P38398 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.4□□□□□ -2.18
BRCA1P38398 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
BRCA1P38398 RNU6-500P-201ENST00000362349 107 ntBASIC1.4□□□□□ -2.19
BRCA1P38398 RNU6-1285P-201ENST00000363480 105 ntBASIC1.4□□□□□ -2.19
BRCA1P38398 RNU6-641P-201ENST00000384006 107 ntBASIC1.4□□□□□ -2.19
BRCA1P38398 MTCYBP36-201ENST00000404146 440 ntBASIC1.4□□□□□ -2.19
BRCA1P38398 AC006026.2-201ENST00000457376 180 ntBASIC1.4□□□□□ -2.19
BRCA1P38398 FO393415.2-201ENST00000480085 343 ntBASIC1.4□□□□□ -2.19
BRCA1P38398 AC027575.1-201ENST00000481064 460 ntBASIC1.4□□□□□ -2.19
BRCA1P38398 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
BRCA1P38398 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.4□□□□□ -2.19
BRCA1P38398 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.4□□□□□ -2.19
BRCA1P38398 MIR4299-201ENST00000577899 72 ntBASIC1.4□□□□□ -2.19
BRCA1P38398 HMGN1P30-201ENST00000589286 268 ntBASIC1.4□□□□□ -2.19
BRCA1P38398 AC138649.3-201ENST00000622154 254 ntBASIC1.4□□□□□ -2.19
BRCA1P38398 AC008993.2-201ENST00000631744 806 ntBASIC1.4□□□□□ -2.19
BRCA1P38398 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.4□□□□□ -2.19
BRCA1P38398 SNORD113-6-201ENST00000363345 75 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 SNORD14B-201ENST00000364533 90 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 RNY4P16-201ENST00000364768 94 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 RNU6-142P-201ENST00000384019 107 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 RNY1P4-201ENST00000384595 115 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 SNORD56-201ENST00000413522 71 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 MTND1P30-201ENST00000441241 901 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 AC079448.1-201ENST00000449377 373 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 RPL31P3-201ENST00000458430 332 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 snoU109.1-201ENST00000459339 135 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 AC018868.1-201ENST00000491307 315 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 AC020699.1-201ENST00000505161 445 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 FAM206BP-201ENST00000510179 541 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 MRPS36P3-201ENST00000519284 130 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.39□□□□□ -2.19
BRCA1P38398 MIR3682-201ENST00000581338 84 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 AP000860.1-201ENST00000605250 559 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 Z82243.1-201ENST00000609432 473 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 AC108706.1-201ENST00000611053 297 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 RNU1-23P-201ENST00000363361 144 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 Y_RNA.393-201ENST00000383936 102 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 RNU6-1106P-201ENST00000390845 107 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 RNU6-607P-201ENST00000411283 108 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 MTND4P20-201ENST00000424125 869 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 UBE2V1P4-201ENST00000425374 344 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.39□□□□□ -2.19
BRCA1P38398 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
BRCA1P38398 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.39□□□□□ -2.19
BRCA1P38398 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.39□□□□□ -2.19
BRCA1P38398 MTND3P25-201ENST00000509243 135 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms