Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MTCO2P3-201ENST00000442543 421 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.28□□□□□ -2.04
ERCC2P18074 SNORD60.2-201ENST00000516883 86 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 NDUFA5P6-201ENST00000542110 379 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.28□□□□□ -2.04
ERCC2P18074 EIF1P4-201ENST00000572664 335 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 MIR4435-1-201ENST00000582552 80 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 MIR5692C1-201ENST00000585309 91 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 AC009314.1-201ENST00000603871 304 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 AC004492.1-201ENST00000607036 742 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 AL357078.3-201ENST00000607528 618 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ERCC2P18074 AC068137.3-201ENST00000639191 341 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
ERCC2P18074 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.28□□□□□ -2.04
ERCC2P18074 OR4G1P-203ENST00000641984 1631 ntBASIC2.28□□□□□ -2.05
ERCC2P18074 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ERCC2P18074 Y_RNA.167-201ENST00000363735 109 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 Y_RNA.231-201ENST00000364358 102 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 MIR144-201ENST00000384886 86 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 RNU6-908P-201ENST00000410160 94 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 ARL5AP1-201ENST00000418991 388 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 MTND3P21-201ENST00000433774 331 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 AC244670.1-201ENST00000436879 112 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.27□□□□□ -2.05
ERCC2P18074 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.27□□□□□ -2.05
ERCC2P18074 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.27□□□□□ -2.05
ERCC2P18074 AC022447.4-201ENST00000504053 364 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.27□□□□□ -2.05
ERCC2P18074 RPL39P5-202ENST00000512505 151 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.27□□□□□ -2.05
ERCC2P18074 SNORA19.2-201ENST00000516013 114 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 SNORA31.11-201ENST00000516528 139 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 AC087854.1-201ENST00000519706 414 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.27□□□□□ -2.05
ERCC2P18074 AC107953.1-201ENST00000522216 297 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 AP005597.4-201ENST00000526762 229 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.27□□□□□ -2.05
ERCC2P18074 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.27□□□□□ -2.05
ERCC2P18074 AC025423.5-201ENST00000550230 219 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 HSPE1P4-201ENST00000550617 308 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 RPS3AP23-202ENST00000574601 686 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 AL034555.1-201ENST00000604816 211 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 RNU6-89P-201ENST00000606519 100 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.27□□□□□ -2.05
ERCC2P18074 AC139792.2-201ENST00000624218 587 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 SNORD98-201ENST00000636377 67 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 AC068137.4-201ENST00000638485 296 ntBASIC2.27□□□□□ -2.05
ERCC2P18074 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.27□□□□□ -2.05
ERCC2P18074 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ERCC2P18074 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ERCC2P18074 RNU6-1106P-201ENST00000390845 107 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AL445529.1-201ENST00000398713 389 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AL139413.1-201ENST00000421309 217 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AL590135.1-201ENST00000422215 156 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AC019205.3-201ENST00000424573 156 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AC016700.2-201ENST00000446011 156 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AC015911.1-201ENST00000495111 156 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 RPL38P4-201ENST00000502376 214 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AC008413.1-201ENST00000511864 177 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 RNA5SP200-201ENST00000516360 103 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 RNU6-965P-201ENST00000516721 96 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 SNORA31.25-201ENST00000517242 134 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AP002770.2-201ENST00000543613 532 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 SNRPGP18-201ENST00000553000 214 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.26□□□□□ -2.05
ERCC2P18074 AC010525.2-201ENST00000590920 195 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AL031274.2-201ENST00000599419 203 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AP001836.1-201ENST00000604675 523 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AC018889.1-201ENST00000605372 397 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 AC064836.2-201ENST00000609491 462 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 DISC2.1-201ENST00000612827 205 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 MIR1321-201ENST00000637766 79 ntBASIC2.26□□□□□ -2.05
ERCC2P18074 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ERCC2P18074 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.25□□□□□ -2.05
ERCC2P18074 AP000560.1-201ENST00000624150 1937 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 RNU4-15P-201ENST00000362613 141 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 RNU6-522P-201ENST00000364497 107 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 Y_RNA.516-201ENST00000384541 124 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 SNORA80E-201ENST00000384744 137 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 RNA5SP508-201ENST00000411327 119 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 AL590556.1-201ENST00000423231 483 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.25□□□□□ -2.05
ERCC2P18074 ERLEC1P1-201ENST00000433806 578 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 IFNA20P-201ENST00000436840 528 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 RPL32P28-201ENST00000443577 397 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.25□□□□□ -2.05
ERCC2P18074 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.25□□□□□ -2.05
ERCC2P18074 AC104435.1-201ENST00000483483 166 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.25□□□□□ -2.05
ERCC2P18074 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.25□□□□□ -2.05
ERCC2P18074 AC091874.1-201ENST00000511402 339 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.25□□□□□ -2.05
ERCC2P18074 SNORA31.16-201ENST00000516773 139 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 RNA5SP137-201ENST00000516833 135 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 AC104576.1-201ENST00000524225 88 ntBASIC2.25□□□□□ -2.05
ERCC2P18074 AC022616.8-201ENST00000533569 253 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms