Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MIR4781-201ENST00000585250 76 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.9□□□□□ -2.27
HLA-DQB2P05538 VN1R107P-201ENST00000601784 209 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 AP003465.2-201ENST00000602571 373 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 AC121334.2-201ENST00000605387 271 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 AC097478.2-201ENST00000610572 514 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 RMST_4.1-201ENST00000616886 107 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 AC004808.1-201ENST00000627671 721 ntBASIC0.9□□□□□ -2.27
HLA-DQB2P05538 AC073343.1-201ENST00000328239 651 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 RNU6-371P-201ENST00000364283 108 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 Y_RNA.255-201ENST00000364581 97 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 MIR548B-201ENST00000385247 97 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 RPL37P10-201ENST00000412884 288 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 USP9YP17-201ENST00000444617 696 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.89□□□□□ -2.27
HLA-DQB2P05538 ART2BP-201ENST00000453501 499 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AL133373.1-201ENST00000497098 94 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AC104806.1-201ENST00000508720 308 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.89□□□□□ -2.27
HLA-DQB2P05538 SNORA31.16-201ENST00000516773 139 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AC008015.1-201ENST00000555505 465 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AC015688.6-201ENST00000577737 104 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 MIR3937-201ENST00000580135 106 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 BNIP3P40-201ENST00000596017 556 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 FAM71BP1-201ENST00000604431 523 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AL034555.1-201ENST00000604816 211 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AC104073.3-201ENST00000610942 955 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 AC097372.5-201ENST00000623665 376 ntBASIC0.89□□□□□ -2.27
HLA-DQB2P05538 RNA5SP327-201ENST00000362494 101 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 SNORD33-201ENST00000362761 85 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 RNU6-931P-201ENST00000363850 107 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 MIR520A-201ENST00000384862 85 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 RNU6-1242P-201ENST00000391052 103 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 RPL23AP32-201ENST00000395315 459 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 AC114491.1-201ENST00000416095 246 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 EIF1P1-201ENST00000421436 341 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 ISCA1P6-201ENST00000427740 390 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DQB2P05538 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DQB2P05538 AC245047.4-201ENST00000433189 144 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.88□□□□□ -2.27
HLA-DQB2P05538 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DQB2P05538 RNA5SP269-201ENST00000459032 137 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 AP000797.1-201ENST00000478870 387 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 RNA5SP337-201ENST00000517007 109 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 AC115990.1-201ENST00000526957 301 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 AC090578.1-201ENST00000604955 591 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 AL139286.2-201ENST00000606838 396 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.88□□□□□ -2.27
HLA-DQB2P05538 AC103706.2-201ENST00000638080 240 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 MTND5P35-201ENST00000557537 1720 ntBASIC0.88□□□□□ -2.27
HLA-DQB2P05538 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HLA-DQB2P05538 MIR373-201ENST00000362273 69 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 Y_RNA.4-201ENST00000362333 112 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 SNORD56.2-201ENST00000363242 71 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 Y_RNA.302-201ENST00000364997 102 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DQB2P05538 SNORA18.2-201ENST00000383865 132 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 RNU6-26P-201ENST00000383985 107 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 MIR544A-201ENST00000384855 91 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 SNORA40.4-201ENST00000390971 128 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.87□□□□□ -2.27
HLA-DQB2P05538 FTH1P12-201ENST00000432137 551 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 AC099677.2-201ENST00000436385 175 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 AL049829.1-201ENST00000465411 156 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 AC145146.1-201ENST00000496370 254 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 AC022447.4-201ENST00000504053 364 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 HSPE1P23-201ENST00000509838 286 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 RNU6-113P-201ENST00000516653 101 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.87□□□□□ -2.27
HLA-DQB2P05538 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.87□□□□□ -2.27
HLA-DQB2P05538 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DQB2P05538 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.87□□□□□ -2.27
HLA-DQB2P05538 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.87□□□□□ -2.27
HLA-DQB2P05538 BNIP3P31-201ENST00000604515 566 ntBASIC0.87□□□□□ -2.27
HLA-DQB2P05538 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DQB2P05538 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
HLA-DQB2P05538 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
HLA-DQB2P05538 MIR337-201ENST00000362281 93 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 RNU5E-7P-201ENST00000365290 117 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 MRPL35P1-201ENST00000404272 572 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 CYCSP33-201ENST00000414485 327 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 CALM2P2-201ENST00000428512 440 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 MTCYBP39-201ENST00000437562 491 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
HLA-DQB2P05538 DYNLT3P2-201ENST00000442517 295 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 SNRPEP8-201ENST00000442866 260 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.86□□□□□ -2.27
HLA-DQB2P05538 ATP5EP1-201ENST00000510257 156 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 AF131216.2-201ENST00000512316 564 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 AC116347.2-201ENST00000514912 523 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 RNU7-40P-201ENST00000516397 64 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 SNORD60.2-201ENST00000516883 86 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms