Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RNU2-32P-201ENST00000411193 191 ntBASIC2.42□□□□□ -2.02
BEST1O76090 RNA5SP270-201ENST00000411361 118 ntBASIC2.42□□□□□ -2.02
BEST1O76090 EDDM3CP-201ENST00000415977 425 ntBASIC2.42□□□□□ -2.02
BEST1O76090 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.42□□□□□ -2.02
BEST1O76090 RPL32P28-201ENST00000443577 397 ntBASIC2.42□□□□□ -2.02
BEST1O76090 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.42□□□□□ -2.02
BEST1O76090 RN7SL429P-201ENST00000479090 223 ntBASIC2.42□□□□□ -2.02
BEST1O76090 RN7SL489P-201ENST00000486185 223 ntBASIC2.42□□□□□ -2.02
BEST1O76090 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.42□□□□□ -2.02
BEST1O76090 RN7SL327P-201ENST00000488659 223 ntBASIC2.42□□□□□ -2.02
BEST1O76090 AC091435.1-201ENST00000505442 584 ntBASIC2.42□□□□□ -2.02
BEST1O76090 RNA5SP24-201ENST00000516478 95 ntBASIC2.42□□□□□ -2.02
BEST1O76090 RNA5SP137-201ENST00000516833 135 ntBASIC2.42□□□□□ -2.02
BEST1O76090 AC109635.3-201ENST00000529536 185 ntBASIC2.42□□□□□ -2.02
BEST1O76090 AP000763.2-201ENST00000540641 163 ntBASIC2.42□□□□□ -2.02
BEST1O76090 MIR5692C1-201ENST00000585309 91 ntBASIC2.42□□□□□ -2.02
BEST1O76090 AC060766.3-201ENST00000591442 263 ntBASIC2.42□□□□□ -2.02
BEST1O76090 RN7SL853P-201ENST00000617250 223 ntBASIC2.42□□□□□ -2.02
BEST1O76090 AL160394.1-201ENST00000624765 724 ntBASIC2.42□□□□□ -2.02
BEST1O76090 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
BEST1O76090 AC092268.1-201ENST00000342691 405 ntBASIC2.41□□□□□ -2.02
BEST1O76090 Y_RNA.167-201ENST00000363735 109 ntBASIC2.41□□□□□ -2.02
BEST1O76090 RNY3P3-201ENST00000363816 102 ntBASIC2.41□□□□□ -2.02
BEST1O76090 Y_RNA.402-201ENST00000383972 102 ntBASIC2.41□□□□□ -2.02
BEST1O76090 RNU6-142P-201ENST00000384019 107 ntBASIC2.41□□□□□ -2.02
BEST1O76090 RNU6-611P-201ENST00000384276 104 ntBASIC2.41□□□□□ -2.02
BEST1O76090 MTCO1P20-201ENST00000425366 358 ntBASIC2.41□□□□□ -2.02
BEST1O76090 RPL23AP95-201ENST00000426806 265 ntBASIC2.41□□□□□ -2.02
BEST1O76090 CBX3P6-201ENST00000430257 527 ntBASIC2.41□□□□□ -2.02
BEST1O76090 AL133396.1-201ENST00000432048 687 ntBASIC2.41□□□□□ -2.02
BEST1O76090 MTND1P34-201ENST00000438556 671 ntBASIC2.41□□□□□ -2.02
BEST1O76090 AL359672.1-201ENST00000442302 409 ntBASIC2.41□□□□□ -2.02
BEST1O76090 AL031659.1-201ENST00000447075 539 ntBASIC2.41□□□□□ -2.02
BEST1O76090 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
BEST1O76090 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.41□□□□□ -2.02
BEST1O76090 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.41□□□□□ -2.02
BEST1O76090 SNRPGP7-201ENST00000469016 106 ntBASIC2.41□□□□□ -2.02
BEST1O76090 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.41□□□□□ -2.02
BEST1O76090 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.41□□□□□ -2.02
BEST1O76090 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.41□□□□□ -2.02
BEST1O76090 SNORA4.4-201ENST00000515921 135 ntBASIC2.41□□□□□ -2.02
BEST1O76090 AC022616.8-201ENST00000533569 253 ntBASIC2.41□□□□□ -2.02
BEST1O76090 AC016957.1-201ENST00000534895 309 ntBASIC2.41□□□□□ -2.02
BEST1O76090 HSPE1P4-201ENST00000550617 308 ntBASIC2.41□□□□□ -2.02
BEST1O76090 SNRPGP17-201ENST00000603780 214 ntBASIC2.41□□□□□ -2.02
BEST1O76090 AC013412.1-201ENST00000610687 192 ntBASIC2.41□□□□□ -2.02
BEST1O76090 AL121757.2-201ENST00000611223 313 ntBASIC2.41□□□□□ -2.02
BEST1O76090 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
BEST1O76090 U4.5-201ENST00000617137 123 ntBASIC2.41□□□□□ -2.02
BEST1O76090 SNORD98-201ENST00000636377 67 ntBASIC2.41□□□□□ -2.02
BEST1O76090 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
BEST1O76090 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
BEST1O76090 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
BEST1O76090 RNU6-522P-201ENST00000364497 107 ntBASIC2.4□□□□□ -2.03
BEST1O76090 RNU4-56P-201ENST00000364700 142 ntBASIC2.4□□□□□ -2.03
BEST1O76090 SNORD73A-201ENST00000386062 65 ntBASIC2.4□□□□□ -2.03
BEST1O76090 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
BEST1O76090 RNU4-26P-201ENST00000410270 107 ntBASIC2.4□□□□□ -2.03
BEST1O76090 AP000275.1-201ENST00000411943 390 ntBASIC2.4□□□□□ -2.03
BEST1O76090 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.4□□□□□ -2.03
BEST1O76090 TRBV12-1-201ENST00000479785 344 ntBASIC2.4□□□□□ -2.03
BEST1O76090 AC016632.1-201ENST00000503994 196 ntBASIC2.4□□□□□ -2.03
BEST1O76090 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.4□□□□□ -2.03
BEST1O76090 AC010486.1-201ENST00000511793 424 ntBASIC2.4□□□□□ -2.03
BEST1O76090 RNU1-41P-201ENST00000516161 162 ntBASIC2.4□□□□□ -2.03
BEST1O76090 RNU1-48P-201ENST00000516400 162 ntBASIC2.4□□□□□ -2.03
BEST1O76090 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.4□□□□□ -2.03
BEST1O76090 AP005597.4-201ENST00000526762 229 ntBASIC2.4□□□□□ -2.03
BEST1O76090 AC026271.5-201ENST00000577873 130 ntBASIC2.4□□□□□ -2.03
BEST1O76090 AC010525.2-201ENST00000590920 195 ntBASIC2.4□□□□□ -2.03
BEST1O76090 AL049779.4-201ENST00000604500 156 ntBASIC2.4□□□□□ -2.03
BEST1O76090 AL034555.1-201ENST00000604816 211 ntBASIC2.4□□□□□ -2.03
BEST1O76090 AC104237.2-201ENST00000612456 443 ntBASIC2.4□□□□□ -2.03
BEST1O76090 MIR6766-201ENST00000622641 72 ntBASIC2.4□□□□□ -2.03
BEST1O76090 MIR203B-201ENST00000636080 86 ntBASIC2.4□□□□□ -2.03
BEST1O76090 ZNF658B-202ENST00000615961 3375 ntBASIC2.4□□□□□ -2.03
BEST1O76090 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
BEST1O76090 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.4□□□□□ -2.03
BEST1O76090 AC080100.1-201ENST00000624239 5356 ntBASIC2.39□□□□□ -2.03
BEST1O76090 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
BEST1O76090 RNY4P14-201ENST00000363656 96 ntBASIC2.39□□□□□ -2.03
BEST1O76090 RNU6-944P-201ENST00000364023 107 ntBASIC2.39□□□□□ -2.03
BEST1O76090 RNU6-1329P-201ENST00000365664 107 ntBASIC2.39□□□□□ -2.03
BEST1O76090 RNU6-214P-201ENST00000384130 107 ntBASIC2.39□□□□□ -2.03
BEST1O76090 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
BEST1O76090 SNORA26.3-201ENST00000391119 136 ntBASIC2.39□□□□□ -2.03
BEST1O76090 SNORD23.1-201ENST00000408212 104 ntBASIC2.39□□□□□ -2.03
BEST1O76090 Y_RNA.597-201ENST00000410463 100 ntBASIC2.39□□□□□ -2.03
BEST1O76090 SRIP2-201ENST00000428470 166 ntBASIC2.39□□□□□ -2.03
BEST1O76090 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.39□□□□□ -2.03
BEST1O76090 ANXA2P1-201ENST00000505539 926 ntBASIC2.39□□□□□ -2.03
BEST1O76090 RNU7-193P-201ENST00000516723 65 ntBASIC2.39□□□□□ -2.03
BEST1O76090 RNU6-667P-201ENST00000517186 102 ntBASIC2.39□□□□□ -2.03
BEST1O76090 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.39□□□□□ -2.03
BEST1O76090 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.39□□□□□ -2.03
BEST1O76090 AC025423.5-201ENST00000550230 219 ntBASIC2.39□□□□□ -2.03
BEST1O76090 TPRKBP2-201ENST00000565969 475 ntBASIC2.39□□□□□ -2.03
BEST1O76090 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
BEST1O76090 AP006437.1-201ENST00000641440 3685 ntBASIC2.38□□□□□ -2.03
BEST1O76090 Y_RNA.38-201ENST00000362617 102 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms