Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SNORA63.1-201ENST00000362493 131 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 Y_RNA.276-201ENST00000364732 109 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 RNU6-700P-201ENST00000391043 107 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 RNU1-101P-201ENST00000391171 127 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 MTCYBP2-201ENST00000407745 171 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 RNA5SP38-201ENST00000410750 119 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 AC007098.1-201ENST00000420122 367 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.63□□□□□ -1.83
ERCC4Q92889 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.63□□□□□ -1.83
ERCC4Q92889 AC008155.2-201ENST00000464337 397 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.63□□□□□ -1.83
ERCC4Q92889 RNA5SP217-201ENST00000515959 91 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 RNU6-928P-201ENST00000516876 104 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 AL590705.4-201ENST00000532209 134 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 AC010186.2-204ENST00000537668 439 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 CR383656.8-201ENST00000549046 145 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 AC104581.2-201ENST00000572227 430 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 AC006600.1-201ENST00000572529 153 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 AC060766.3-201ENST00000591442 263 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 HSPE1P7-201ENST00000604681 321 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 AL121655.1-201ENST00000605811 308 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 AC107871.2-201ENST00000612894 502 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 AL138880.2-201ENST00000616214 239 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 AC012314.7-201ENST00000619693 93 ntBASIC3.63□□□□□ -1.83
ERCC4Q92889 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ERCC4Q92889 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.63□□□□□ -1.83
ERCC4Q92889 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
ERCC4Q92889 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.63□□□□□ -1.83
ERCC4Q92889 ZNF72P-201ENST00000425869 1908 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
ERCC4Q92889 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ERCC4Q92889 RNU6-702P-201ENST00000364982 107 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 SNORA63.7-201ENST00000365579 123 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 RNU6-505P-201ENST00000384427 107 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 MIR183-201ENST00000384958 110 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 RPL21P1-201ENST00000399532 476 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 MIR887-201ENST00000401258 79 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 RN7SKP111-201ENST00000410349 271 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 AC099548.1-201ENST00000421443 426 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 BPY2DP-201ENST00000422208 265 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.62□□□□□ -1.83
ERCC4Q92889 AC243964.1-201ENST00000441814 261 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 RN7SKP210-201ENST00000459176 261 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.62□□□□□ -1.83
ERCC4Q92889 AC006445.2-201ENST00000510061 472 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 SNORA31.1-201ENST00000515993 133 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 SNORA31.5-201ENST00000516190 133 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 AC109329.1-201ENST00000518744 317 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 AC131281.1-201ENST00000522984 164 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.62□□□□□ -1.83
ERCC4Q92889 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.62□□□□□ -1.83
ERCC4Q92889 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.62□□□□□ -1.83
ERCC4Q92889 AL391261.3-201ENST00000557194 520 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.62□□□□□ -1.83
ERCC4Q92889 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.62□□□□□ -1.83
ERCC4Q92889 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.62□□□□□ -1.83
ERCC4Q92889 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.62□□□□□ -1.83
ERCC4Q92889 MIR4276-201ENST00000584832 70 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.62□□□□□ -1.83
ERCC4Q92889 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.62□□□□□ -1.83
ERCC4Q92889 AC069200.1-201ENST00000609511 323 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.62□□□□□ -1.83
ERCC4Q92889 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.62□□□□□ -1.83
ERCC4Q92889 AC241585.2-209ENST00000638217 143 ntBASIC3.62□□□□□ -1.83
ERCC4Q92889 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.62□□□□□ -1.83
ERCC4Q92889 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ERCC4Q92889 Y_RNA.123-201ENST00000363338 102 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 RNA5SP50-201ENST00000363731 107 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 Y_RNA.551-201ENST00000384661 102 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 SNORA12.2-201ENST00000391040 156 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 RPL21P3-201ENST00000395517 478 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ERCC4Q92889 Y_RNA.592-201ENST00000410274 109 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 AC092423.1-201ENST00000430165 186 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ERCC4Q92889 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.61□□□□□ -1.83
ERCC4Q92889 RPL21P2-201ENST00000440049 481 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.61□□□□□ -1.83
ERCC4Q92889 HMGN2P10-201ENST00000448085 265 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 FCF1P4-201ENST00000448326 183 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 AC146507.2-201ENST00000460608 476 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 RPS29P20-201ENST00000489592 171 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 RNU6-711P-201ENST00000517255 106 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.61□□□□□ -1.83
ERCC4Q92889 AC007536.1-201ENST00000533382 349 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
ERCC4Q92889 MYL12BP1-201ENST00000569826 507 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 AL451007.1-201ENST00000595491 289 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.61□□□□□ -1.83
ERCC4Q92889 U2.1-201ENST00000618978 145 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 U6.105-201ENST00000637379 88 ntBASIC3.61□□□□□ -1.83
ERCC4Q92889 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ERCC4Q92889 Y_RNA.152-201ENST00000363578 100 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 SNORA51.4-201ENST00000364993 124 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 Y_RNA.556-201ENST00000384677 113 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 SNORA69.1-201ENST00000390904 137 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 RN7SKP58-201ENST00000411010 305 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.6□□□□□ -1.83
ERCC4Q92889 CYCSP32-201ENST00000440548 321 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms