Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 RNU6-801P-201ENST00000364087 105 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 RNA5SP513-201ENST00000364648 118 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 RNU6-1130P-201ENST00000365434 107 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 Y_RNA.361-201ENST00000365515 120 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 SNORA18.2-201ENST00000383865 132 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 SNORA67.2-201ENST00000384300 149 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 RNU6-1117P-201ENST00000384525 104 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 HMGN2P20-201ENST00000437531 273 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 RN7SL385P-201ENST00000468873 276 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 RNU2-44P-201ENST00000516795 194 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 AC091178.1-203ENST00000584586 279 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 AL591926.8-201ENST00000616876 211 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 AC006111.3-201ENST00000622137 383 ntBASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.31□□□□□ -1.72
DEPDC4Q8N2C3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 Y_RNA.182-201ENST00000363880 111 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 RNU1-32P-201ENST00000363937 159 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 SNORD87-201ENST00000364849 89 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 SNORA62-201ENST00000365493 153 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 AC011753.3-201ENST00000443436 406 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 TPT1P12-201ENST00000448968 492 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 PPIAP15-201ENST00000479662 484 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 RN7SKP164-201ENST00000516138 266 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 AC093249.4-201ENST00000564755 259 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 MIR3684-201ENST00000579779 74 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 MIR3667-201ENST00000581025 74 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 AC023043.4-201ENST00000612081 449 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 AC013791.1-201ENST00000616619 62 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 AL022401.1-201ENST00000619498 108 ntBASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.3□□□□□ -1.72
DEPDC4Q8N2C3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 MIR448-201ENST00000362131 111 ntBASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 RNU6-103P-201ENST00000363686 107 ntBASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 Y_RNA.287-201ENST00000364853 94 ntBASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 RNU6-275P-201ENST00000364910 107 ntBASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 RNU6-381P-201ENST00000391259 108 ntBASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 RPS20P10-201ENST00000451209 253 ntBASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 U8.19-201ENST00000459095 133 ntBASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 MIR4270-201ENST00000581799 70 ntBASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 RNU1-30P-201ENST00000606575 163 ntBASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 AC010329.5-201ENST00000623497 2174 ntBASIC4.29□□□□□ -1.72
DEPDC4Q8N2C3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 RNA5SP22-201ENST00000365393 109 ntBASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 Y_RNA.368-201ENST00000365547 113 ntBASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 AL590762.2-201ENST00000395798 571 ntBASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 MIR298-201ENST00000401212 88 ntBASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 AL355497.1-201ENST00000406262 551 ntBASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 AP000567.1-201ENST00000406413 156 ntBASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 EBAG9P1-201ENST00000418955 543 ntBASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 PPBPP1-201ENST00000510807 373 ntBASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 RNA5SP446-201ENST00000515955 82 ntBASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 SNORA31.1-201ENST00000515993 133 ntBASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 SNORA31.5-201ENST00000516190 133 ntBASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DEPDC4Q8N2C3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms