Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.57□□□□□ -2
BEST3Q8N1M1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
BEST3Q8N1M1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.56□□□□□ -2
BEST3Q8N1M1 RNU1-35P-201ENST00000362782 153 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 Y_RNA.151-201ENST00000363566 112 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 RNU1-112P-201ENST00000364401 164 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 Y_RNA.356-201ENST00000365475 113 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
BEST3Q8N1M1 AL133475.1-201ENST00000404414 305 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 RNU2-52P-201ENST00000410680 190 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 AC104332.2-201ENST00000429959 156 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 AL109933.2-201ENST00000452651 260 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 AC008571.1-201ENST00000467232 300 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 RPL22P13-201ENST00000493291 347 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.56□□□□□ -2
BEST3Q8N1M1 AC116337.1-201ENST00000509680 687 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.56□□□□□ -2
BEST3Q8N1M1 SNORA31.6-201ENST00000516241 130 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.56□□□□□ -2
BEST3Q8N1M1 AC109329.1-201ENST00000518744 317 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 AP005902.1-201ENST00000521358 186 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 HPRT1P3-201ENST00000539521 576 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 RPS3AP23-202ENST00000574601 686 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.56□□□□□ -2
BEST3Q8N1M1 AL356157.2-201ENST00000605122 111 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 AC018889.1-201ENST00000605372 397 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 MIR6128-201ENST00000615528 109 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.56□□□□□ -2
BEST3Q8N1M1 AC241585.2-209ENST00000638217 143 ntBASIC2.56□□□□□ -2
BEST3Q8N1M1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.56□□□□□ -2
BEST3Q8N1M1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.56□□□□□ -2
BEST3Q8N1M1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.56□□□□□ -2
BEST3Q8N1M1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.56□□□□□ -2
BEST3Q8N1M1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.56□□□□□ -2
BEST3Q8N1M1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 SNORD114-19-201ENST00000363072 75 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 SNORA68.1-201ENST00000364537 132 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 Y_RNA.474-201ENST00000384341 102 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 Y_RNA.482-201ENST00000384377 111 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 RNU6-790P-201ENST00000384479 105 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 Y_RNA.529-201ENST00000384586 119 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 MIR544A-201ENST00000384855 91 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 MIR517A-201ENST00000385001 87 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 AL590004.2-201ENST00000404787 371 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 AL513475.1-201ENST00000406602 315 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 AP000275.1-201ENST00000411943 390 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 AC138623.1-201ENST00000418060 216 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.55□□□□□ -2
BEST3Q8N1M1 DAP3P1-201ENST00000441522 278 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 AC009296.1-201ENST00000443146 155 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 Y_RNA.635-201ENST00000459041 101 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 RPL36AP48-201ENST00000485521 314 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 AC092593.1-201ENST00000515413 1815 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.55□□□□□ -2
BEST3Q8N1M1 ELOCP31-201ENST00000540463 467 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 IMMP1LP2-201ENST00000552954 492 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 MIR4765-201ENST00000585007 77 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 POLR3GP2-201ENST00000588366 668 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 AP001836.1-201ENST00000604675 523 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 AC113139.1-201ENST00000605049 239 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 AC007792.1-201ENST00000623023 402 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 MIR7515-201ENST00000637837 67 ntBASIC2.55□□□□□ -2
BEST3Q8N1M1 AC002543.1-201ENST00000299783 1954 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.54□□□□□ -2
BEST3Q8N1M1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
BEST3Q8N1M1 MIR449A-201ENST00000362113 91 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 RNU6-859P-201ENST00000362728 107 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 RNU6-227P-201ENST00000362865 103 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 RNU6-692P-201ENST00000384496 107 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 RNU6-1222P-201ENST00000384615 107 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 MIR196B-201ENST00000384852 84 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 RNA5SP21-201ENST00000410917 96 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.54□□□□□ -2
BEST3Q8N1M1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.54□□□□□ -2
BEST3Q8N1M1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.54□□□□□ -2
BEST3Q8N1M1 ARL5AP4-201ENST00000430731 512 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 Z98742.2-201ENST00000431564 187 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.54□□□□□ -2
BEST3Q8N1M1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.54□□□□□ -2
BEST3Q8N1M1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.54□□□□□ -2
BEST3Q8N1M1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.54□□□□□ -2
BEST3Q8N1M1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.54□□□□□ -2
BEST3Q8N1M1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.54□□□□□ -2
BEST3Q8N1M1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.54□□□□□ -2
BEST3Q8N1M1 RAB11AP2-201ENST00000545905 639 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 AC079598.5-201ENST00000547460 117 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.54□□□□□ -2
BEST3Q8N1M1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.54□□□□□ -2
BEST3Q8N1M1 ZNF861P-201ENST00000588126 639 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.54□□□□□ -2
BEST3Q8N1M1 AC090115.4-201ENST00000609970 188 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 MIR1302-1-201ENST00000637932 143 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
BEST3Q8N1M1 AC010329.5-201ENST00000623497 2174 ntBASIC2.54□□□□□ -2
BEST3Q8N1M1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BEST3Q8N1M1 RNU6-601P-201ENST00000384540 107 ntBASIC2.53□□□□□ -2
BEST3Q8N1M1 MIR9-1-201ENST00000385198 89 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms