Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HMGCS1Q01581 AL365400.1-201ENST00000431854 640 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 SCARNA18-201ENST00000459004 134 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 RPL23AP42-201ENST00000471152 471 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGCS1Q01581 AC116337.1-201ENST00000509680 687 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 SNORA4.4-201ENST00000515921 135 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.67□□□□□ -2.14
HMGCS1Q01581 AC233702.2-202ENST00000562547 291 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 MIR4299-201ENST00000577899 72 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 MIR5583-1-201ENST00000580941 59 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 AL031274.2-201ENST00000599419 203 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 AC073648.5-201ENST00000603502 305 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 RNU6-6P-201ENST00000606623 107 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 MIR6845-201ENST00000613182 61 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 AC005296.1-201ENST00000616145 209 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 Z69720.2-201ENST00000624755 279 ntBASIC1.67□□□□□ -2.14
HMGCS1Q01581 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGCS1Q01581 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMGCS1Q01581 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMGCS1Q01581 U3.13-201ENST00000364804 214 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 RNU5E-7P-201ENST00000365290 117 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 SNORD116-2-201ENST00000384274 95 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 SNORD116-6-201ENST00000384711 96 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 RNU6-903P-201ENST00000391270 109 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 AL353193.1-201ENST00000421444 268 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 MTCYBP8-201ENST00000422855 651 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 RPL7P54-201ENST00000438336 674 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 DNAJC19P4-201ENST00000440115 345 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGCS1Q01581 AC117503.1-201ENST00000472241 394 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGCS1Q01581 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGCS1Q01581 RN7SKP298-201ENST00000515950 94 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 RNU2-69P-201ENST00000516061 100 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.66□□□□□ -2.14
HMGCS1Q01581 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGCS1Q01581 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMGCS1Q01581 AC104581.2-201ENST00000572227 430 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 MTND1P15-201ENST00000579262 949 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGCS1Q01581 AC123912.5-201ENST00000605470 343 ntBASIC1.66□□□□□ -2.14
HMGCS1Q01581 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGCS1Q01581 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGCS1Q01581 RNU6-212P-201ENST00000362642 104 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 RNU6-552P-201ENST00000362869 119 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
HMGCS1Q01581 RNU6-1103P-201ENST00000384150 107 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 MIR504-201ENST00000385065 83 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 SNORA26.9-201ENST00000391322 122 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 RNA5SP390-201ENST00000410191 113 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 RNU2-23P-201ENST00000410545 195 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 OR9R1P-201ENST00000412200 877 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 BTF3L4P1-201ENST00000413813 468 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 MTCO2P19-201ENST00000427513 598 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC007969.2-201ENST00000441891 191 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 PRPS1P1-201ENST00000445305 876 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.65□□□□□ -2.15
HMGCS1Q01581 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.65□□□□□ -2.15
HMGCS1Q01581 AL356010.1-201ENST00000456364 102 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 RPS3AP17-201ENST00000472594 777 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 AL121594.1-201ENST00000475906 575 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC018868.1-201ENST00000491307 315 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC079382.1-201ENST00000493346 557 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.65□□□□□ -2.15
HMGCS1Q01581 RPL23AP63-201ENST00000498752 471 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 HMGB3P17-201ENST00000504195 649 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGCS1Q01581 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMGCS1Q01581 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC105417.1-201ENST00000514691 285 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC109329.1-201ENST00000518744 317 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 AK6P1-201ENST00000540219 478 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 MIR3611-201ENST00000584484 83 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC011494.1-201ENST00000596454 237 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC012493.3-201ENST00000604494 112 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC007684.1-201ENST00000609671 477 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 uc_338.11-201ENST00000619132 160 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC022418.1-201ENST00000624118 445 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGCS1Q01581 U4.7-201ENST00000638126 106 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMGCS1Q01581 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
HMGCS1Q01581 AC002543.1-201ENST00000299783 1954 ntBASIC1.65□□□□□ -2.15
HMGCS1Q01581 SNORA25B-201ENST00000365507 128 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMGCS1Q01581 RNU6-434P-201ENST00000384376 107 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HMGCS1Q01581 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HMGCS1Q01581 RNU2-29P-201ENST00000410423 189 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 RNA5SP450-201ENST00000411206 102 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGCS1Q01581 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGCS1Q01581 AC073464.1-201ENST00000429823 534 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms