Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDC42EP1Q00587 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDC42EP1Q00587 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CDC42EP1Q00587 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.31□□□□□ -1.88
CDC42EP1Q00587 RNU6-1032P-201ENST00000384100 107 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 RNU6-843P-201ENST00000384454 104 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 Y_RNA.577-201ENST00000384794 101 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 MIR544A-201ENST00000384855 91 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 Z98941.1-201ENST00000407764 100 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.31□□□□□ -1.88
CDC42EP1Q00587 EEF1A1P41-201ENST00000414667 207 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.31□□□□□ -1.88
CDC42EP1Q00587 AC007969.2-201ENST00000441891 191 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 SNRPGP7-201ENST00000469016 106 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 HMGN1P10-201ENST00000474557 553 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.31□□□□□ -1.88
CDC42EP1Q00587 SCARNA20.6-201ENST00000517251 106 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 AC092447.9-201ENST00000603395 144 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 AC091152.3-201ENST00000604227 325 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 AC091925.1-201ENST00000623204 462 ntBASIC3.31□□□□□ -1.88
CDC42EP1Q00587 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.31□□□□□ -1.88
CDC42EP1Q00587 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 RBBP8P1-201ENST00000449447 1844 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 AC010889.1-201ENST00000566193 2666 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 HAUS6P2-201ENST00000433254 2404 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 SNORA80A-201ENST00000363922 136 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 RNU6-595P-201ENST00000363944 107 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 RNU1-115P-201ENST00000365329 160 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 MRPL42P3-201ENST00000401492 326 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 RNU6-1156P-201ENST00000410365 100 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 AL031659.1-201ENST00000447075 539 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 AC117440.1-201ENST00000474107 571 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 AL049830.2-201ENST00000480072 201 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 AC025281.1-201ENST00000567026 265 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 AC004584.2-201ENST00000570407 410 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 AC010653.1-201ENST00000571108 881 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 AC116312.1-201ENST00000606841 314 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 MIR7153-201ENST00000637758 57 ntBASIC3.3□□□□□ -1.88
CDC42EP1Q00587 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CDC42EP1Q00587 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDC42EP1Q00587 MIR767-201ENST00000390228 109 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDC42EP1Q00587 RNU6-700P-201ENST00000391043 107 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 AC096649.2-201ENST00000416186 393 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 AC092423.1-201ENST00000430165 186 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.29□□□□□ -1.88
CDC42EP1Q00587 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.29□□□□□ -1.88
CDC42EP1Q00587 AL136097.1-201ENST00000456945 913 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 AP001486.1-201ENST00000463339 476 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 AL049873.1-201ENST00000480540 376 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.29□□□□□ -1.88
CDC42EP1Q00587 RNU1-143P-201ENST00000516296 146 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.29□□□□□ -1.88
CDC42EP1Q00587 ELOCP29-201ENST00000588193 334 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.29□□□□□ -1.88
CDC42EP1Q00587 U1.23-201ENST00000610293 146 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 MIR7106-201ENST00000612419 65 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 MIR1244-1-201ENST00000612829 85 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 RNU1-68P-201ENST00000615382 146 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 U7.8-201ENST00000619968 63 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 U1.39-201ENST00000621562 146 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 AL137790.1-201ENST00000634283 177 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 MIR1244-3-201ENST00000635744 85 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 MIR1244-2-201ENST00000636449 85 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 MIR1244-4-202ENST00000636813 85 ntBASIC3.29□□□□□ -1.88
CDC42EP1Q00587 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42EP1Q00587 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42EP1Q00587 Y_RNA.39-201ENST00000362620 98 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 Y_RNA.145-201ENST00000363527 102 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 SNORA14A-201ENST00000364773 135 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 RNU6-968P-201ENST00000384076 107 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 MIR625-201ENST00000385047 85 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 MIR591-201ENST00000385290 95 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 MIR147B-201ENST00000390185 80 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 RNU6-750P-201ENST00000390946 107 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 AC113618.1-201ENST00000416747 285 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 AC007098.1-201ENST00000420122 367 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 AL139281.1-201ENST00000422120 335 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.28□□□□□ -1.88
CDC42EP1Q00587 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.28□□□□□ -1.88
CDC42EP1Q00587 AL441985.1-201ENST00000457727 251 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 AP001025.1-201ENST00000486139 332 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 AC091874.1-201ENST00000511402 339 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.28□□□□□ -1.88
CDC42EP1Q00587 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.28□□□□□ -1.88
CDC42EP1Q00587 AL590705.4-201ENST00000532209 134 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms