Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 HMGB1P33-201ENST00000563485 527 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-1.06□□□□□ -2.58
RPL39P62891 AF129408.1-201ENST00000608767 431 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
RPL39P62891 AC136475.10-201ENST00000620253 385 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 AC121333.1-201ENST00000567488 2709 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 AC107982.1-201ENST00000507171 1300 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 RNU4-73P-201ENST00000363164 141 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 SNORA2A-201ENST00000383885 135 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 MIR604-201ENST00000384880 94 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 RNU6-233P-201ENST00000410845 141 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 AL096829.2-201ENST00000446582 742 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-1.07□□□□□ -2.58
RPL39P62891 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-1.07□□□□□ -2.58
RPL39P62891 RNU6-491P-201ENST00000516099 110 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 AC007834.2-201ENST00000536310 343 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 MIR4636-201ENST00000582271 80 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC-1.07□□□□□ -2.58
RPL39P62891 AC055876.5-201ENST00000605667 259 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 AC005021.1-201ENST00000608730 355 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 PCGEM1.1-201ENST00000613431 131 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 AC006213.4-201ENST00000616184 634 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 AL391099.1-201ENST00000624635 187 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 AL512643.1-201ENST00000635735 524 ntBASIC-1.07□□□□□ -2.58
RPL39P62891 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-1.08□□□□□ -2.58
RPL39P62891 SNORD116-13-201ENST00000384408 92 ntBASIC-1.08□□□□□ -2.58
RPL39P62891 RNU6-269P-201ENST00000391077 97 ntBASIC-1.08□□□□□ -2.58
RPL39P62891 MIR938-201ENST00000401216 83 ntBASIC-1.08□□□□□ -2.58
RPL39P62891 UBE2V1P15-201ENST00000407776 448 ntBASIC-1.08□□□□□ -2.58
RPL39P62891 MTCO3P43-201ENST00000440974 771 ntBASIC-1.08□□□□□ -2.58
RPL39P62891 ELOCP24-201ENST00000456370 334 ntBASIC-1.08□□□□□ -2.58
RPL39P62891 AC126365.2-201ENST00000580630 379 ntBASIC-1.08□□□□□ -2.58
RPL39P62891 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-1.08□□□□□ -2.58
RPL39P62891 AC007363.1-201ENST00000604736 620 ntBASIC-1.08□□□□□ -2.58
RPL39P62891 FTX_3.1-201ENST00000610451 147 ntBASIC-1.08□□□□□ -2.58
RPL39P62891 AC090116.1-201ENST00000615679 446 ntBASIC-1.08□□□□□ -2.58
RPL39P62891 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-1.08□□□□□ -2.58
RPL39P62891 RNA5SP98-201ENST00000363158 137 ntBASIC-1.09□□□□□ -2.58
RPL39P62891 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.09□□□□□ -2.58
RPL39P62891 MIR548H2-201ENST00000408874 88 ntBASIC-1.09□□□□□ -2.58
RPL39P62891 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-1.09□□□□□ -2.58
RPL39P62891 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-1.09□□□□□ -2.58
RPL39P62891 MTND4P32-201ENST00000437189 1237 ntBASIC-1.09□□□□□ -2.58
RPL39P62891 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-1.09□□□□□ -2.58
RPL39P62891 RNA5SP268-201ENST00000516828 124 ntBASIC-1.09□□□□□ -2.58
RPL39P62891 AF235103.2-201ENST00000525753 346 ntBASIC-1.09□□□□□ -2.58
RPL39P62891 AC079598.5-201ENST00000547460 117 ntBASIC-1.09□□□□□ -2.58
RPL39P62891 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-1.09□□□□□ -2.58
RPL39P62891 AL136317.1-201ENST00000612653 226 ntBASIC-1.09□□□□□ -2.58
RPL39P62891 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-1.09□□□□□ -2.58
RPL39P62891 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-1.09□□□□□ -2.58
RPL39P62891 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-1.1□□□□□ -2.59
RPL39P62891 SNORD115-24-201ENST00000363528 82 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 MIR625-201ENST00000385047 85 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 RNU6-735P-201ENST00000410612 107 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 AL022718.1-201ENST00000412004 84 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 AL353621.1-201ENST00000418219 243 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 AC011233.1-201ENST00000422812 283 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-1.1□□□□□ -2.59
RPL39P62891 RPL23AP50-201ENST00000434149 455 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 AC024082.2-201ENST00000434771 238 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 MTND4LP10-201ENST00000435146 291 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 AC079776.3-201ENST00000450665 370 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 AC003071.1-201ENST00000451219 789 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 RNU7-165P-201ENST00000458864 60 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-1.1□□□□□ -2.59
RPL39P62891 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-1.1□□□□□ -2.59
RPL39P62891 TUG1_2.1-201ENST00000614234 87 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 MTND4P5-201ENST00000435821 1374 ntBASIC-1.1□□□□□ -2.59
RPL39P62891 RNU6-160P-201ENST00000384591 107 ntBASIC-1.11□□□□□ -2.59
RPL39P62891 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.11□□□□□ -2.59
RPL39P62891 MIR224-201ENST00000384889 81 ntBASIC-1.11□□□□□ -2.59
RPL39P62891 MIR1302-8-201ENST00000408342 128 ntBASIC-1.11□□□□□ -2.59
RPL39P62891 AC130509.1-201ENST00000464158 433 ntBASIC-1.11□□□□□ -2.59
RPL39P62891 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-1.11□□□□□ -2.59
RPL39P62891 COX7A2P2-201ENST00000505291 250 ntBASIC-1.11□□□□□ -2.59
RPL39P62891 RNU6-586P-201ENST00000517265 104 ntBASIC-1.11□□□□□ -2.59
RPL39P62891 AC116165.2-201ENST00000616705 206 ntBASIC-1.11□□□□□ -2.59
RPL39P62891 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-1.12□□□□□ -2.59
RPL39P62891 SNORD118-201ENST00000363593 134 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 RNA5SP517-201ENST00000364724 117 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 RNU6-331P-201ENST00000384724 107 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-1.12□□□□□ -2.59
RPL39P62891 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC-1.12□□□□□ -2.59
RPL39P62891 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-1.12□□□□□ -2.59
RPL39P62891 RPL30P6-201ENST00000475925 342 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-1.12□□□□□ -2.59
RPL39P62891 AC091860.1-201ENST00000505723 432 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 AC104057.1-201ENST00000515547 497 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 RNU2-12P-201ENST00000517216 168 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 AC011979.2-201ENST00000527568 352 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-1.12□□□□□ -2.59
RPL39P62891 MIR548Y-201ENST00000582739 110 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 AL022067.1-201ENST00000602426 454 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 AL590229.1-201ENST00000603497 542 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 AC025588.3-201ENST00000604182 274 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 Pinc.1-201ENST00000616452 154 ntBASIC-1.12□□□□□ -2.59
RPL39P62891 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-1.13□□□□□ -2.59
RPL39P62891 MTND1P28-201ENST00000435623 950 ntBASIC-1.13□□□□□ -2.59
RPL39P62891 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms