Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RPL31P60-201ENST00000478450 367 ntBASIC2.11□□□□□ -2.07
ATRXP46100 AL135752.1-201ENST00000479477 471 ntBASIC2.11□□□□□ -2.07
ATRXP46100 HMGB1P35-201ENST00000503360 598 ntBASIC2.11□□□□□ -2.07
ATRXP46100 HMGB3P15-201ENST00000507326 574 ntBASIC2.11□□□□□ -2.07
ATRXP46100 CYCSP27-201ENST00000527643 293 ntBASIC2.11□□□□□ -2.07
ATRXP46100 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.11□□□□□ -2.07
ATRXP46100 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.11□□□□□ -2.07
ATRXP46100 MIR6128-201ENST00000615528 109 ntBASIC2.11□□□□□ -2.07
ATRXP46100 AC008568.2-201ENST00000623862 2313 ntBASIC2.11□□□□□ -2.07
ATRXP46100 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ATRXP46100 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.11□□□□□ -2.07
ATRXP46100 SMIM11P1-201ENST00000369586 178 ntBASIC2.11□□□□□ -2.07
ATRXP46100 SNORA11.4-201ENST00000408823 129 ntBASIC2.11□□□□□ -2.07
ATRXP46100 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.11□□□□□ -2.07
ATRXP46100 DAP3P1-201ENST00000441522 278 ntBASIC2.11□□□□□ -2.07
ATRXP46100 CBWD4P-201ENST00000445695 655 ntBASIC2.11□□□□□ -2.07
ATRXP46100 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.11□□□□□ -2.07
ATRXP46100 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.11□□□□□ -2.07
ATRXP46100 RNU6-1046P-201ENST00000516538 107 ntBASIC2.11□□□□□ -2.07
ATRXP46100 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.11□□□□□ -2.07
ATRXP46100 AC022790.1-201ENST00000522872 204 ntBASIC2.11□□□□□ -2.07
ATRXP46100 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.11□□□□□ -2.07
ATRXP46100 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.11□□□□□ -2.07
ATRXP46100 RNA5SP108-201ENST00000605921 117 ntBASIC2.11□□□□□ -2.07
ATRXP46100 AL158196.1-201ENST00000616786 434 ntBASIC2.11□□□□□ -2.07
ATRXP46100 AL031601.2-202ENST00000622650 282 ntBASIC2.11□□□□□ -2.07
ATRXP46100 Z99571.1-201ENST00000636677 394 ntBASIC2.11□□□□□ -2.07
ATRXP46100 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.1□□□□□ -2.07
ATRXP46100 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ATRXP46100 SNORD113-7-201ENST00000363762 77 ntBASIC2.1□□□□□ -2.07
ATRXP46100 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.1□□□□□ -2.07
ATRXP46100 SNORA51.11-201ENST00000384442 131 ntBASIC2.1□□□□□ -2.07
ATRXP46100 SNORA67.5-201ENST00000391036 107 ntBASIC2.1□□□□□ -2.07
ATRXP46100 RN7SKP140-201ENST00000411196 284 ntBASIC2.1□□□□□ -2.07
ATRXP46100 MTND4P27-201ENST00000450813 1354 ntBASIC2.1□□□□□ -2.07
ATRXP46100 OR2AQ1P-201ENST00000451972 200 ntBASIC2.1□□□□□ -2.07
ATRXP46100 MTCO3P10-201ENST00000455912 772 ntBASIC2.1□□□□□ -2.07
ATRXP46100 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
ATRXP46100 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.1□□□□□ -2.07
ATRXP46100 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.1□□□□□ -2.07
ATRXP46100 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.1□□□□□ -2.07
ATRXP46100 AC040926.1-201ENST00000530195 238 ntBASIC2.1□□□□□ -2.07
ATRXP46100 DNAJC8P1-201ENST00000554535 372 ntBASIC2.1□□□□□ -2.07
ATRXP46100 AC105137.2-201ENST00000569073 466 ntBASIC2.1□□□□□ -2.07
ATRXP46100 AC008737.2-201ENST00000599446 118 ntBASIC2.1□□□□□ -2.07
ATRXP46100 AC124303.1-201ENST00000605703 360 ntBASIC2.1□□□□□ -2.07
ATRXP46100 RNU6-85P-201ENST00000605989 107 ntBASIC2.1□□□□□ -2.07
ATRXP46100 AC090971.5-201ENST00000621102 293 ntBASIC2.1□□□□□ -2.07
ATRXP46100 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.1□□□□□ -2.07
ATRXP46100 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ATRXP46100 RNU6-1317P-201ENST00000364582 104 ntBASIC2.1□□□□□ -2.07
ATRXP46100 RNU6-890P-201ENST00000384121 107 ntBASIC2.1□□□□□ -2.07
ATRXP46100 SNORA67.3-201ENST00000384366 140 ntBASIC2.1□□□□□ -2.07
ATRXP46100 SNORD73A-201ENST00000386062 65 ntBASIC2.1□□□□□ -2.07
ATRXP46100 Y_RNA.579-201ENST00000390939 94 ntBASIC2.1□□□□□ -2.07
ATRXP46100 ARL5AP1-201ENST00000418991 388 ntBASIC2.1□□□□□ -2.07
ATRXP46100 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.1□□□□□ -2.07
ATRXP46100 AC007560.1-201ENST00000426912 237 ntBASIC2.1□□□□□ -2.07
ATRXP46100 AL353997.1-201ENST00000432936 108 ntBASIC2.1□□□□□ -2.07
ATRXP46100 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.1□□□□□ -2.07
ATRXP46100 AC009237.8-201ENST00000445492 379 ntBASIC2.1□□□□□ -2.07
ATRXP46100 PCNPP5-201ENST00000452246 481 ntBASIC2.1□□□□□ -2.07
ATRXP46100 RNU7-138P-201ENST00000459479 64 ntBASIC2.1□□□□□ -2.07
ATRXP46100 RPL9P9-202ENST00000466501 579 ntBASIC2.1□□□□□ -2.07
ATRXP46100 AL049874.1-201ENST00000489560 388 ntBASIC2.1□□□□□ -2.07
ATRXP46100 HMGN1P7-201ENST00000491722 313 ntBASIC2.1□□□□□ -2.07
ATRXP46100 AC139453.3-201ENST00000493276 369 ntBASIC2.1□□□□□ -2.07
ATRXP46100 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.1□□□□□ -2.07
ATRXP46100 AC114801.2-201ENST00000503825 781 ntBASIC2.1□□□□□ -2.07
ATRXP46100 RNU6-1092P-201ENST00000516955 87 ntBASIC2.1□□□□□ -2.07
ATRXP46100 RNU6-1315P-201ENST00000517187 99 ntBASIC2.1□□□□□ -2.07
ATRXP46100 RNU6-323P-201ENST00000521915 107 ntBASIC2.1□□□□□ -2.07
ATRXP46100 COX6CP5-201ENST00000527162 228 ntBASIC2.1□□□□□ -2.07
ATRXP46100 OR4R1P-201ENST00000529879 463 ntBASIC2.1□□□□□ -2.07
ATRXP46100 AC090897.2-201ENST00000581715 130 ntBASIC2.1□□□□□ -2.07
ATRXP46100 AL356280.1-201ENST00000603614 379 ntBASIC2.1□□□□□ -2.07
ATRXP46100 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.1□□□□□ -2.07
ATRXP46100 U2.17-201ENST00000611454 95 ntBASIC2.1□□□□□ -2.07
ATRXP46100 MIR1244-1-201ENST00000612829 85 ntBASIC2.1□□□□□ -2.07
ATRXP46100 MIR1244-3-201ENST00000635744 85 ntBASIC2.1□□□□□ -2.07
ATRXP46100 MIR1244-2-201ENST00000636449 85 ntBASIC2.1□□□□□ -2.07
ATRXP46100 MIR1244-4-202ENST00000636813 85 ntBASIC2.1□□□□□ -2.07
ATRXP46100 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
ATRXP46100 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.09□□□□□ -2.07
ATRXP46100 RNU6-882P-201ENST00000391025 103 ntBASIC2.09□□□□□ -2.07
ATRXP46100 RHEBP3-201ENST00000411920 351 ntBASIC2.09□□□□□ -2.07
ATRXP46100 AL353621.1-201ENST00000418219 243 ntBASIC2.09□□□□□ -2.07
ATRXP46100 HSPE1P1-201ENST00000421494 318 ntBASIC2.09□□□□□ -2.07
ATRXP46100 RPL7P46-201ENST00000425129 740 ntBASIC2.09□□□□□ -2.07
ATRXP46100 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.09□□□□□ -2.07
ATRXP46100 AL356867.1-201ENST00000429623 299 ntBASIC2.09□□□□□ -2.07
ATRXP46100 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.09□□□□□ -2.07
ATRXP46100 FGF7P3-201ENST00000454645 303 ntBASIC2.09□□□□□ -2.07
ATRXP46100 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.09□□□□□ -2.07
ATRXP46100 AC096745.1-201ENST00000509945 370 ntBASIC2.09□□□□□ -2.07
ATRXP46100 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.09□□□□□ -2.07
ATRXP46100 SNORA31.19-201ENST00000517079 126 ntBASIC2.09□□□□□ -2.07
ATRXP46100 AP005639.2-201ENST00000527592 928 ntBASIC2.09□□□□□ -2.07
ATRXP46100 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.09□□□□□ -2.07
ATRXP46100 SCOCP1-201ENST00000554676 349 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms